RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 C1orf122Q6ZSJ8 110 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 BTN2A1Q7KYR7 527 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 OR11L1Q8NGX0 322 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 OR2AE1Q8NHA4 323 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 TBC1D15Q8TC07 691 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM71F1Q96KD3 344 aaPredicted RBP9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 PRRC1Q96M27 445 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 NUAK2Q9H093 628 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 KIF17Q9P2E2 1029 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 BAG5Q9UL15 447 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 LHFPL6Q9Y693 200 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 FXYD1O00168 92 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 PSMB10P40306 273 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 RPS27P42677 84 aaKnown RBP9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 PRKCDQ05655 676 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 ST3GAL3Q11203 375 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 GK2Q14410 553 aaPredicted RBP9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 OR8G1Q15617 311 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 LY6EQ16553 131 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 FBLN7Q53RD9 439 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM205BPQ63HN1 556 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 SYT9Q86SS6 491 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 CALHM3Q86XJ0 350 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 GLB1L2Q8IW92 636 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 C1orf87Q8N0U7 546 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 DYDC1Q8WWB3 177 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 RASSF5Q8WWW0 418 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 APOBEC3DQ96AK3 386 aaPredicted RBP9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 ADAT1Q9BUB4 502 aaKnown RBP9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 FNDC11Q9BVV2 318 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 PPA2Q9H2U2 334 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 C1orf123Q9NWV4 160 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 VSX1Q9NZR4 365 aaPredicted RBP9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 ERVK-18Q9QC07 812 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 RAB21Q9UL25 225 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
NSMCE1-202ENST00000561960 DNAH9Q9NYC9 4486 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 A0A087WUU8 490 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 A0A0G2JND7 137 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 A6NLC8 198 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 DVL1O14640 695 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 KHDRBS3O75525 346 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF682O95780 498 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 LCATP04180 440 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 CD14P08571 375 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 SELLP14151 372 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 CDKN2AP42771 156 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 COX10Q12887 443 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 ZBTB37Q5TC79 503 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM122BQ7Z309 247 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 ZSCAN4Q8NAM6 433 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 PCYOX1LQ8NBM8 494 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 OR5L1Q8NGL2 311 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 C17orf50Q8WW18 174 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 SPRYD4Q8WW59 207 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF583Q96ND8 569 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 CCL13Q99616 98 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 HCAR1Q9BXC0 346 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 PPP1R3EQ9H7J1 279 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM96BQ9Y3D0 163 aa9.62□□□□□ -0.87
NSMCE1-202ENST00000561960 ANKRD61A6NGH8 418 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 PPP1R3DO95685 299 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 ACSM4P0C7M7 580 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 RAD23AP54725 363 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 IKZF1Q13422 519 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 TRAM2Q15035 370 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 ZBED5Q49AG3 693 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 SLC35E4Q6ICL7 350 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM90A1Q86YD7 464 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 FAM216BQ8N7L0 139 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 OR5T2Q8NGG2 359 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 PPP1R35Q8TAP8 253 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 FNDC8Q8TC99 324 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 RORBQ92753 470 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 MAGEB18Q96M61 343 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 PITX2Q99697 317 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 TMEM120AQ9BXJ8 343 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
NSMCE1-202ENST00000561960 OOEPA6NGQ2 149 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 LGALS8O00214 317 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 MRASO14807 208 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 DIRAS1O95057 198 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 IGF2P01344 180 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 VIMP08670 466 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 VSIG8P0DPA2 414 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 SLC2A1P11166 492 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 PSKH1P11801 424 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 KDELR2P33947 212 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms