RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 OTOGQ6ZRI0 2925 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 MAP1AP78559 2803 aaPredicted RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 ITPR3Q14573 2671 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 A0A1B0GWJ7 208 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 M0R233 179 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 CLPTM1O96005 669 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 F12P00748 615 aaPredicted RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 ADH4P08319 380 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 MRPL3P09001 348 aaKnown RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 H2BFMP0C1H6 154 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 DBTP11182 482 aaKnown RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 GCH1P30793 250 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 CDKN1AP38936 164 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 MMP15P51511 669 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 PSG7Q13046 419 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 TAF13Q15543 124 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 TMEM255AQ5JRV8 349 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF684Q5T5D7 378 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 SPNS3Q6ZMD2 512 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 DNM1P46Q6ZS02 220 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 CYGBQ8WWM9 190 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 SPSB4Q96A44 273 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 SYT3Q9BQG1 590 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 REPIN1Q9BWE0 567 aaKnown RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 OR51B6Q9H340 312 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 OPA3Q9H6K4 179 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 CYSLTR2Q9NS75 346 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 NKIRAS2Q9NYR9 191 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 MYEF2Q9P2K5 600 aaKnown RBP8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 DUSP13Q9UII6 198 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 LRP12Q9Y561 859 aa8.24□□□□□ -1.09
RABGGTA-221ENST00000561055 DOCK11Q5JSL3 2073 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 IQCF6A8MYZ5 107 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 PRR32B1ATL7 298 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF670-ZNF695F2Z2N8 137 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 XRCC2O43543 280 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 SULT1C4O75897 302 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 CLIC3O95833 236 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 IGHA1P01876 353 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 LCATP04180 440 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 HSD11B1P28845 292 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 MPV17P39210 176 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 CX3CR1P49238 355 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 MMP16P51512 607 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 PRKXP51817 358 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 EFNA4P52798 201 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ART1P52961 327 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 CXCR4P61073 352 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ACTC1P68032 377 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ACTA1P68133 377 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 IL5RAQ01344 420 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF91Q05481 1191 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 RAB40BQ12829 278 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF322Q6U7Q0 402 aaPredicted RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 LRRN1Q6UXK5 716 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 KRT77Q7Z794 578 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 KRTAP1-3Q8IUG1 177 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 C8orf59Q8N0T1 100 aaPredicted RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF283Q8N7M2 679 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 OR52H1Q8NGJ2 320 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 NEU4Q8WWR8 484 aaPredicted RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 CMBLQ96DG6 245 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 RNFT2Q96EX2 444 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 JAM3Q9BX67 310 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 MROQ9BYG7 248 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 RAB1BQ9H0U4 201 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 TAAR3PQ9P1P4 343 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 AASSQ9UDR5 926 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 PURGQ9UJV8 347 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 FZR1Q9UM11 496 aa8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-221ENST00000561055 A0A1W2PQL4 384 aaPredicted RBP8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 C17orf100A8MU93 164 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 NDUFS7O75251 213 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 SRSF10O75494 262 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 FADS2O95864 444 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 IGHV4-39P01824 125 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 MT-ND5P03915 603 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ADRA2AP08913 450 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 GNAO1P09471 354 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 SELEP16581 610 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ANOS1P23352 680 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ATP6V1E1P36543 226 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 DDOSTP39656 456 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 SLC6A9P48067 706 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 HSPA13P48723 471 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 RIDAP52758 137 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 AQP4P55087 323 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ATP5J2P56134 94 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF121P58317 390 aaPredicted RBP8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 ZNF85Q03923 595 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 MALLQ13021 153 aa8.22□□□□□ -1.09
RABGGTA-221ENST00000561055 CDK5R2Q13319 367 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms