RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 OR2G2Q8NGZ5 317 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ZNF799Q96GE5 643 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 LYZL4Q96KX0 146 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 MGLLQ99685 303 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 MND1Q9BWT6 205 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 MRPS26Q9BYN8 205 aaKnown RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 POFUT1Q9H488 388 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 IKZF2Q9UKS7 526 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 R4GMQ9 66 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 FLNCQ14315 2725 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 HEATR1Q9H583 2144 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 A0A1B0GTI1 187 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 TMEM269A0A1B0GVZ9 245 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 C5orf49A4QMS7 147 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 MYL12BO14950 172 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 TTRP02766 147 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CD1AP06126 327 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 TACSTD2P09758 323 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 SLC2A1P11166 492 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CPEP16870 476 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CD40P25942 277 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 TGFBR2P37173 567 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CX3CR1P49238 355 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CCR9P51686 369 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 NAAAQ02083 359 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 SPOCK1Q08629 439 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CDK5R1Q15078 307 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 MED22Q15528 200 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CCDC58Q4VC31 144 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 NCMAPQ5T1S8 102 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 RPL22L1Q6P5R6 122 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 ZNF367Q7RTV3 350 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 PHC2Q8IXK0 858 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 ELMOD2Q8IZ81 293 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 ALDH16A1Q8IZ83 802 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 RDH10Q8IZV5 341 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 OR8B12Q8NGG6 310 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 LILRB1Q8NHL6 650 aaPredicted RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 SSC4DQ8WTU2 575 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 RGP1Q92546 391 aaPredicted RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 SGK3Q96BR1 496 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 MUCL1Q96DR8 90 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 ZC3HAV1LQ96H79 300 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 C4orf45Q96LM5 186 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 DACH2Q96NX9 599 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 DOK1Q99704 481 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 PBOV1Q9GZY1 135 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 CHCHD3Q9NX63 227 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 CRIM1Q9NZV1 1036 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 NUFIP1Q9UHK0 495 aaKnown RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 OR52A1Q9UKL2 312 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 STARD10Q9Y365 291 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.11
HERC1-206ENST00000559996 SNX5Q9Y5X3 404 aa8.09□□□□□ -1.11
HERC1-206ENST00000559996 DOPEY1Q5JWR5 2465 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 A0A1W2PPR1 153 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 FAM221AA4D161 298 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 TUBAL3A6NHL2 446 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 ACOD1A6NK06 481 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 M0R1B8 84 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 SC5DO75845 299 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 ZFPL1O95159 310 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 CLPTM1O96005 669 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 PCSK6P29122 969 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 HOXC12P31275 282 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 APLNRP35414 380 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 MAGEB1P43366 347 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 GDI2P50395 445 aaKnown RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 GBX2P52951 348 aaPredicted RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 UCP2P55851 309 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 TPTEP56180 551 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 ERVS71-1P61550 626 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 NKX6-1P78426 367 aaPredicted RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 PLP2Q04941 152 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 MLLT11Q13015 90 aaPredicted RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 GPR50Q13585 617 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 NEDD8Q15843 81 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 TIGD6Q17RP2 521 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 UNQ9370/PRO34162Q6UXP9 181 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.08□□□□□ -1.12
HERC1-206ENST00000559996 ZNF283Q8N7M2 679 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 OR13F1Q8NGS4 319 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 OR10AC1Q8NH08 325 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 SPSB4Q96A44 273 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 YIPF6Q96EC8 236 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 PDCD1LG2Q9BQ51 273 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 TMEM204Q9BSN7 226 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 MED18Q9BUE0 208 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 TBCCD1Q9NVR7 557 aa8.08□□□□□ -1.12
HERC1-206ENST00000559996 NDRG3Q9UGV2 375 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms