RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 FAM89BQ8N5H3 189 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CLDN22Q8N7P3 220 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 Q8NA96 180 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FAM98AQ8NCA5 519 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 PHOSPHO1Q8TCT1 267 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 DYNC2LI1Q8TCX1 351 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SMAP2Q8WU79 429 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ACOT11Q8WXI4 607 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 PHF21AQ96BD5 680 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 OTULINQ96BN8 352 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ZNF524Q96C55 264 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 NEURL2Q9BR09 285 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TTTY12Q9BZ98 90 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SLC22A4Q9H015 551 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 MMP27Q9H306 513 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 DSN1Q9H410 356 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SAV1Q9H4B6 383 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 PTGES2Q9H7Z7 377 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TMEM27Q9HBJ8 222 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 AKIP1Q9NQ31 210 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ERVK13-1Q9NX77 482 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TVP23BQ9NYZ1 205 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 OR6C3Q9NZP0 311 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 B4GALT7Q9UBV7 327 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 HSPB7Q9UBY9 170 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 UBQLN2Q9UHD9 624 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 KLF2Q9Y5W3 355 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SHANK1Q9Y566 2161 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 IGKV1D-42A0A075B6H8 117 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ZC3H12DA2A288 527 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ARPC3O15145 178 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 DHHO43323 396 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ACTL6AO96019 429 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CCNOP22674 350 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CBLP22681 906 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 RCVRNP35243 200 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 GGT2P36268 569 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CEACAM3P40198 252 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 GABARAPL2P60520 117 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CSNK2A1P68400 391 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 RIN1Q13671 783 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 KEAP1Q14145 624 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 MICAQ29983 383 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 KLHL22Q53GT1 634 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 RAET1LQ5VY80 246 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 BICRALQ6AI39 1079 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SPINK14Q6IE38 97 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ESPNLQ6ZVH7 1005 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TMPRSS11FQ6ZWK6 438 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 MBOAT2Q6ZWT7 520 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ABHD12BQ7Z5M8 362 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 S100A7AQ86SG5 101 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FAM58AQ8N1B3 248 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TCEANCQ8N8B7 351 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 EXD3Q8N9H8 876 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 CSNK2A3Q8NEV1 391 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 NUDT10Q8NFP7 164 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 OR4K17Q8NGC6 315 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 GLYATL2Q8WU03 294 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FBLIM1Q8WUP2 373 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FBXO17Q96EF6 278 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 ADGRG7Q96K78 797 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 HRASLS5Q96KN8 279 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 RDH12Q96NR8 316 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 YTHDF1Q9BYJ9 559 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TTTY10Q9BZA0 68 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TOLLIPQ9H0E2 274 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 EGLN3Q9H6Z9 239 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 METTL8Q9H825 291 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 GALNT9Q9HCQ5 603 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 KLHL1Q9NR64 748 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 MRPL22Q9NWU5 206 aaKnown RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 PSORS1C1Q9UIG5 152 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 FBXL2Q9UKC9 423 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 B3GNT3Q9Y2A9 372 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
ZEB1-212ENST00000558655 SPIN1Q9Y657 262 aaPredicted RBP3.61□□□□□ -1.83
ZEB1-212ENST00000558655 IGF2RP11717 2491 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 LOC102725191A0A1B0GVB3 256 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 C5orf52A6NGY3 159 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 CGB1A6NKQ9 187 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 CPSF4LA6NMK7 179 aaKnown RBP3.6□□□□□ -1.83
ZEB1-212ENST00000558655 ACOT7O00154 380 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 RGS5O15539 181 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 EFNA2O43921 213 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 LY86O95711 162 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 CRYABP02511 175 aaKnown RBP3.6□□□□□ -1.83
ZEB1-212ENST00000558655 CPN1P15169 458 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 MSR1P21757 451 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 ACVR2AP27037 513 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 DPP4P27487 766 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 BDKRB2P30411 391 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 DCTDP32321 178 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 MAGEB1P43366 347 aa3.6□□□□□ -1.83
ZEB1-212ENST00000558655 DNASE1L1P49184 302 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms