RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 RAB4AP20338 218 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CRABP1P29762 137 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GRK6P43250 576 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 NUTF2P61970 127 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 HYAL4Q2M3T9 481 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GXYLT1Q4G148 440 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 TMEM52BQ4KMG9 183 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 VAX1Q5SQQ9 334 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF529Q6P280 563 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR4N5Q8IXE1 308 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 BEND2Q8NDZ0 799 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CCDC54Q8NEL0 328 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 M1APQ8TC57 530 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR10C1Q96KK4 312 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 NOL4LQ96MY1 436 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GNRHR2Q96P88 292 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ELOVL3Q9HB03 270 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CGGBP1Q9UFW8 167 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 K7EPK0 472 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF217O75362 1048 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 RENP00797 406 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 PMP2P02689 132 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 RNH1P13489 461 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 S1PR1P21453 382 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF84P51523 738 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 NKX6-1P78426 367 aaPredicted RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 CCINQ13939 588 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ERV3-1Q14264 604 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 TAF1CQ15572 869 aaPredicted RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 UBE2V2Q15819 145 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ALG10Q5BKT4 473 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 MESTQ5EB52 335 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 PEG10Q86TG7 708 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 LYPD6Q86Y78 171 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF679Q8IYX0 411 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 FAM71E2Q8N5Q1 922 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF615Q8N8J6 731 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 NTNG2Q96CW9 530 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SOX7Q9BT81 388 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 METTL8Q9H825 291 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SPHK2Q9NRA0 654 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 FBXL17Q9UF56 701 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 AMDHD2Q9Y303 409 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 RHBDD3Q9Y3P4 386 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SCN5AQ14524 2016 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 C4orf47A7E2U8 309 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 CLDN4O14493 209 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 TGOLN2O43493 480 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 FPR2P25090 351 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 PPM1FP49593 454 aaPredicted RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 CTXN1P60606 82 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 RPS15AP62244 130 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 NHLH2Q02577 135 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ROM1Q03395 351 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF141Q15928 474 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF674Q2M3X9 581 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 RPUSD3Q6P087 351 aaKnown RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 UNQ6494/PRO21346Q6UXR6 183 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 TAF8Q7Z7C8 310 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 OR4K15Q8NH41 348 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 ARRDC3Q96B67 414 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SLC25A44Q96H78 314 aaPredicted RBP10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SLC46A2Q9BY10 475 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 SIRT7Q9NRC8 400 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
PCAT29-201ENST00000558411 DCDC2BA2VCK2 349 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 GPR89AB7ZAQ6 455 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 B3GALT2O43825 422 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 SOD3P08294 240 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 GPR89BP0CG08 455 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 SMIM10L1P0DMW3 83 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 COX5BP10606 129 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 ZNF708P17019 499 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 FCGR2CP31995 323 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 S100A10P60903 97 aa10.02□□□□□ -0.81
PCAT29-201ENST00000558411 SUPT4H1P63272 117 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms