RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ACSM4P0C7M7 580 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 PATE4P0C8F1 98 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 IDH3GP51553 393 aaPredicted RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 ZNF121P58317 390 aaPredicted RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 RPS23P62266 143 aaKnown RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 TAB1Q15750 504 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 TSTQ16762 297 aaKnown RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 PHC2Q8IXK0 858 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 ELMOD2Q8IZ81 293 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 RFLNBQ8N5W9 214 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 CPEB3Q8NE35 698 aaKnown RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 FGFBP3Q8TAT2 258 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 RPS4Y2Q8TD47 263 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 GPR148Q8TDV2 347 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 C10orf35Q96D05 121 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 C4orf45Q96LM5 186 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 OPALINQ96PE5 141 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 C1QTNF5Q9BXJ0 243 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 TTTY10Q9BZA0 68 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 FAM192AQ9GZU8 254 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 PBOV1Q9GZY1 135 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 ESRP2Q9H6T0 727 aaKnown RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 NEK6Q9HC98 313 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 NDUFB11Q9NX14 153 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 FAM206AQ9NX38 181 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 HHLA2Q9UM44 414 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 SSR3Q9UNL2 185 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 GRIP1Q9Y3R0 1128 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 KLF2Q9Y5W3 355 aaPredicted RBP10.78□□□□□ -0.68
TPM1-209ENST00000558072 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
TPM1-209ENST00000558072 A0A1B0GVI7 797 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 DHRS7CA6NNS2 312 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 J3QKU1 62 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 AGFG2O95081 481 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 ADRA2AP08913 450 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 PSKH1P11801 424 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 CD36P16671 472 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 ACHEP22303 614 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 CCNOP22674 350 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 TMBIM6P55061 237 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
TPM1-209ENST00000558072 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 LIPKQ5VXJ0 399 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 DOK3Q7L591 496 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 FTMTQ8N4E7 242 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 ZNF420Q8TAQ5 688 aaPredicted RBP10.77□□□□□ -0.69
TPM1-209ENST00000558072 GHSRQ92847 366 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 ZNF75AQ96N20 296 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 FRRS1LQ9P0K9 344 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 ST6GALNAC2Q9UJ37 374 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 STUB1Q9UNE7 303 aa10.77□□□□□ -0.69
TPM1-209ENST00000558072 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 LOC390937A0A1W2PQ73 354 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 ZNF701M0R085 212 aaPredicted RBP10.76□□□□□ -0.69
TPM1-209ENST00000558072 TBX1O43435 398 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 SRSF10O75494 262 aaKnown RBP10.76□□□□□ -0.69
TPM1-209ENST00000558072 ARL6IP5O75915 188 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 ATE1O95260 518 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 RAF1P04049 648 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 SELEP16581 610 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 CCKARP32238 428 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 DDOSTP39656 456 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 PSMB10P40306 273 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 SELENOVP59797 346 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 TUBA1BP68363 451 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 MOGQ16653 247 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 COLCA1Q6ZS62 124 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 FAM57BQ71RH2 274 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 TUBA1AQ71U36 451 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 COMMD2Q86X83 199 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 ANKRD13BQ86YJ7 626 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 RAB2BQ8WUD1 216 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 SLITRK2Q9H156 845 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 G6PC2Q9NQR9 355 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 SLC22A13Q9Y226 551 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 RELNP78509 3460 aa10.76□□□□□ -0.69
TPM1-209ENST00000558072 DIDO1Q9BTC0 2240 aaKnown RBP10.76□□□□□ -0.69
TPM1-209ENST00000558072 LOC100509620A0A075B734 347 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 TRDV1A0A1B0GX56 115 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 A0A1W2PR80 420 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 WIPF3A6NGB9 483 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 PRR32B1ATL7 298 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 ZNF879B4DU55 563 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 C19orf84I3L1E1 186 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 M0R1B8 84 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 MAGEB4O15481 346 aaPredicted RBP10.75□□□□□ -0.69
TPM1-209ENST00000558072 SYT7O43581 403 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 RGS9O75916 674 aaPredicted RBP10.75□□□□□ -0.69
TPM1-209ENST00000558072 ZFPL1O95159 310 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 CECR9P0C854 216 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 LIPAP38571 399 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 ZNF83P51522 516 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 GTF2A1P52655 376 aaPredicted RBP10.75□□□□□ -0.69
TPM1-209ENST00000558072 UCP2P55851 309 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 NAAAQ02083 359 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 RSPO1Q2MKA7 263 aaPredicted RBP10.75□□□□□ -0.69
TPM1-209ENST00000558072 BEX5Q5H9J7 111 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 WDR38Q5JTN6 314 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms