RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CD200P41217 278 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 BPIFB3P59826 476 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 DBPQ10586 325 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-224ENST00000557713 FGD3Q5JSP0 725 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 CLEC12AQ5QGZ9 265 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 SLC18B1Q6NT16 456 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 SMARCD3Q6STE5 483 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 Q6YL49 198 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 SLC26A10Q8NG04 563 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 FAM162AQ96A26 154 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 DHRS1Q96LJ7 313 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 ERMAPQ96PL5 475 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-224ENST00000557713 EFCAB1Q9HAE3 211 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 AURKCQ9UQB9 309 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 FAM32AQ9Y421 112 aaKnown RBP13.27□□□□□ -0.29
SCFD1-224ENST00000557713 A0A1B0GUS0 222 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 FAM181BA6NEQ2 426 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 C22orf46C9J442 243 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 FAM20BO75063 409 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 IRF2P14316 349 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 ECH1Q13011 328 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 OCLNQ16625 522 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 RFX4Q33E94 735 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 HACD2Q6Y1H2 254 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 ZBTB46Q86UZ6 589 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 LINC00346Q8IVM7 164 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 C19orf18Q8NEA5 215 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 OR11L1Q8NGX0 322 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 NMNAT3Q96T66 252 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 NOX4Q9NPH5 578 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 PNRC2Q9NPJ4 139 aaKnown RBP13.26□□□□□ -0.29
SCFD1-224ENST00000557713 CYB5R1Q9UHQ9 305 aa13.26□□□□□ -0.29
SCFD1-224ENST00000557713 F5H5K5 113 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 TNFRSF13BO14836 293 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 ARPC3O15145 178 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 DIRAS1O95057 198 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 PTBP3O95758 552 aaKnown RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 LCATP04180 440 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 GGT2P36268 569 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 HOXA4Q00056 320 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 SRSF4Q08170 494 aaKnown RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 MPPED2Q15777 294 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 SLC36A3Q495N2 470 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 ZNF362Q5T0B9 420 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 GPR157Q5UAW9 335 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 PITX2Q99697 317 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 ATF6BQ99941 703 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 KCTD14Q9BQ13 255 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 BEX1Q9HBH7 125 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 UFSP2Q9NUQ7 469 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 DCAF13Q9NV06 445 aaKnown RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-224ENST00000557713 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
SCFD1-224ENST00000557713 NDUFAB1O14561 156 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 RENP00797 406 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 HIST1H1CP16403 213 aaKnown RBP13.24□□□□□ -0.29
SCFD1-224ENST00000557713 NPY4RP50391 375 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 RELBQ01201 579 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 TRAP1Q12931 704 aaKnown RBP13.24□□□□□ -0.29
SCFD1-224ENST00000557713 MALLQ13021 153 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 CD276Q5ZPR3 534 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 GLYATQ6IB77 296 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 FIP1L1Q6UN15 594 aaKnown RBP13.24□□□□□ -0.29
SCFD1-224ENST00000557713 PGAP1Q75T13 922 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 TMEM86BQ8N661 226 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 FAM86B1Q8N7N1 296 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 OR2AJ1Q8NGZ0 328 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 TBX15Q96SF7 602 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 PCGF1Q9BSM1 259 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 CHIAQ9BZP6 476 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 OR52D1Q9H346 318 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
SCFD1-224ENST00000557713 TNFRSF19Q9NS68 423 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-224ENST00000557713 RNF7Q9UBF6 113 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 ABCD2Q9UBJ2 740 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 CTSZQ9UBR2 303 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 VWFP04275 2813 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 TGP01266 2768 aa13.24□□□□□ -0.29
SCFD1-224ENST00000557713 CENPVL3A0A0U1RRI6 287 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 OR6C68A6NDL8 312 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 ZNF879B4DU55 563 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 P2RY10O00398 339 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 NDUFA7O95182 113 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 KNG1P01042 644 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 LIPFP07098 398 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 SFTPBP07988 381 aa13.23□□□□□ -0.29
SCFD1-224ENST00000557713 MELTFP08582 738 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms