RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 B3GALT6Q96L58 329 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 COL21A1Q96P44 957 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 P2RX4Q99571 388 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 PARD6GQ9BYG4 376 aaPredicted RBP2.31□□□□□ -2.04
TRAV28-201ENST00000557548 ULBP2Q9BZM5 246 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 DEFB129Q9H1M3 183 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 TRIM45Q9H8W5 580 aaPredicted RBP2.31□□□□□ -2.04
TRAV28-201ENST00000557548 C8orf4Q9NR00 106 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 CTPS2Q9NRF8 586 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 CCL28Q9NRJ3 127 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 ABCB10Q9NRK6 738 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 IMP3Q9NV31 184 aaKnown RBP2.31□□□□□ -2.04
TRAV28-201ENST00000557548 CLN6Q9NWW5 311 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 CLEC2DQ9UHP7 191 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 MRM2Q9UI43 246 aaKnown RBP2.31□□□□□ -2.04
TRAV28-201ENST00000557548 RAB23Q9ULC3 237 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 SCML1Q9UN30 329 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 ST3GAL6Q9Y274 331 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 VSIG4Q9Y279 399 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 HYOU1Q9Y4L1 999 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 FADS3Q9Y5Q0 445 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 MAP3K5Q99683 1374 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 GRIN2AQ12879 1464 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 MAGI1Q96QZ7 1491 aaPredicted RBP2.31□□□□□ -2.04
TRAV28-201ENST00000557548 ABCA10Q8WWZ4 1543 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 ABCC2Q92887 1545 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 THSD7BQ9C0I4 1608 aa2.31□□□□□ -2.04
TRAV28-201ENST00000557548 LRRK1Q38SD2 2015 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 A0A0B4J2A0 478 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 KLF18A0A0U1RQI7 1052 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 A0A1B0GTI1 187 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 PSMB11A5LHX3 300 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 FABP12A6NFH5 140 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SLC22A20A6NK97 555 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 E5RI56 91 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MKRN2OSH3BPM6 223 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SMLR1H3BR10 107 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 HAT1O14929 419 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RAD51CO43502 376 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 XRCC2O43543 280 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 GMDSO60547 372 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MPDU1O75352 247 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 ENTPD5O75356 428 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 ZMPSTE24O75844 475 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 TNFSF13O75888 250 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 UTS2O95399 124 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 TDP2O95551 362 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RAB3DO95716 219 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 OXTP01178 125 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 IFNA6P05013 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 KLK1P06870 262 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 PET100P0DJ07 73 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SMIM10L1P0DMW3 83 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 ICAM2P13598 275 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MAGP20916 626 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 GATA2P23769 480 aaPredicted RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 UGT2B10P36537 528 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 GPX4P36969 197 aaPredicted RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RBMXP38159 391 aaKnown RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CSNK1DP48730 415 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 TGM4P49221 684 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SERPINB9P50453 376 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RAB7AP51149 207 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 GTF2A1P52655 376 aaPredicted RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 FGF8P55075 233 aaPredicted RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MLF1P58340 268 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RPL10AP62906 217 aaKnown RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MXD1Q05195 221 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MED21Q13503 144 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 KIAA0040Q15053 153 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 OR7A5Q15622 319 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 NSDHLQ15738 373 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 C15orf32Q32M92 178 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 TCTEX1D4Q5JR98 221 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 PAGE3Q5JUK9 113 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 PRMT9Q6P2P2 845 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CBLN2Q8IUK8 224 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SPAG16Q8N0X2 631 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SYS1Q8N2H4 156 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 OR2A1Q8NGT9 310 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MRAPQ8TCY5 172 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 IL22RA2Q969J5 263 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 CPNE4Q96A23 557 aaPredicted RBP2.3□□□□□ -2.04
TRAV28-201ENST00000557548 DYNLL2Q96FJ2 89 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SMIM10Q96HG1 83 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 RNF170Q96K19 258 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SERPINB11Q96P15 392 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 PLEKHF1Q96S99 279 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 FOXC2Q99958 501 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 SH3GL3Q99963 347 aa2.3□□□□□ -2.04
TRAV28-201ENST00000557548 MICU1Q9BPX6 476 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms