RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PZPP20742 1482 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZFYVE16Q7Z3T8 1539 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CFAP74Q9C0B2 1584 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UGGT1Q9NYU2 1555 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZCCHC11Q5TAX3 1644 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 COL24A1Q17RW2 1714 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GU03 582 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SYCE3A1L190 88 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 G3V3Y1 287 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 H3BN98 237 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 EI24O14681 340 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PHYHO14832 338 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UBDO15205 165 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SLC16A4O15374 487 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OXTP01178 125 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CD5P06127 495 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CT45A10P0DMU9 189 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF17P17021 662 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NPR2P20594 1047 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GTF2E2P29084 291 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PRDX6P30041 224 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 AQP2P41181 271 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CSKP41240 450 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MAGEA2P43356 314 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PPOXP50336 477 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 HNRNPA3P51991 378 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CEBPGP53567 150 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UCNP55089 124 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RGS8P57771 180 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OGDHQ02218 1023 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RIPPLY1Q0D2K3 151 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PDIA2Q13087 525 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SLC39A6Q13433 755 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MPPED2Q15777 294 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GUCA2BQ16661 112 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MICAQ29983 383 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZBED5Q49AG3 693 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SLC8B1Q6J4K2 584 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 LPCAT3Q6P1A2 487 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 DNM1P34Q6PK57 102 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CBLN3Q6UW01 205 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF589Q86UQ0 364 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM17Q86X19 198 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CATSPER3Q86XQ3 398 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 C4orf33Q8N1A6 199 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CADM2Q8N3J6 435 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF561Q8N587 486 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MDS2Q8NDY4 140 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CD200R1Q8TD46 325 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ITLN1Q8WWA0 313 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NAT6Q93015 286 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TCEAL3Q969E4 200 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TOMM40LQ969M1 308 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CELF6Q96J87 481 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SENP8Q96LD8 212 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 HSFY1Q96LI6 401 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 EBF4Q9BQW3 602 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RPP25Q9BUL9 199 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ILKAPQ9H0C8 392 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RPF2Q9H7B2 306 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NECAP2Q9NVZ3 263 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 WARS2Q9UGM6 360 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SNX24Q9Y343 169 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UGT2A1Q9Y4X1 527 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CSDC2Q9Y534 153 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MYH3P11055 1940 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 USP47Q96K76 1375 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TNS3Q68CZ2 1445 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC18Q5T9S5 1454 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UNC13BO14795 1591 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SHANK3Q9BYB0 1731 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GUS0 222 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 A8MUA0 341 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 A8MUI8 341 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 A8MWP6 167 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 EVPLLA8MZ36 301 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C9J4A7 227 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 K7ENP7 123 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CHST10O43529 356 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CHST1O43916 411 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GALR3O60755 368 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CA11O75493 328 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 STX11O75558 287 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 KBTBD11O94819 623 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FADS2O95864 444 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IGSF6O95976 241 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CT62P0C5K7 136 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TPSB2P20231 275 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 LOXP28300 417 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 S100A11P31949 105 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CYLC1P35663 651 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MAP2K4P45985 399 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ACOT2P49753 483 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RGS6P49758 472 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ATP4BP51164 291 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CCR6P51684 374 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SEC61GP60059 68 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BTG1P62324 171 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SELENOTP62341 195 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MESDQ14696 234 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms