RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 EIF5AL1Q6IS14 154 aaKnown RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 SFTPA2Q8IWL1 248 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF721Q8TF20 911 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 RNF133Q8WVZ7 376 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 DCUN1D4Q92564 292 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 MAP3K3Q99759 626 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 GAL3ST1Q99999 423 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 RPP25Q9BUL9 199 aaKnown RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 GPR27Q9NS67 375 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ATPIF1Q9UII2 106 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 IGKV3D-11A0A0A0MRZ8 115 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 EEF1E1-BLOC1S5C9J1V9 151 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 F8W036 122 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 DDAH2O95865 285 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 CELA2BP08218 269 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-232ENST00000557487 H2BFMP0C1H6 154 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 PET100P0DJ07 73 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 SERPINF1P36955 418 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 RAB13P51153 203 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 BLOC1S1P78537 153 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 OR10K2Q6IF99 312 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 KCTD9Q7L273 389 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 DCXRQ7Z4W1 244 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 MARCH3Q86UD3 253 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 MISPQ8IVT2 679 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 PAQR4Q8N4S7 273 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-232ENST00000557487 OR1M1Q8NGA1 313 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 OR5D14Q8NGL3 314 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 CASTOR1Q8WTX7 329 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM131Q92545 1883 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 WIPF3A6NGB9 483 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 FASLGP48023 281 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 PJVKQ0ZLH3 352 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 FZD2Q14332 565 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 EBPQ15125 230 aaKnown RBP14.53□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF529Q6P280 563 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 POMZP3Q6PJE2 187 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 UNQ6126/PRO20091Q6UXV3 157 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 RHOUQ7L0Q8 258 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 MDGA2Q7Z553 956 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 UNC80Q8N2C7 3258 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF321PQ8N8H1 164 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 TERB2Q8NHR7 220 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM234Q8WY98 164 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 MVB12AQ96EY5 273 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 FOXN4Q96NZ1 517 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 KLHDC3Q9BQ90 382 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 ZFP57Q9NU63 452 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 DNAJB11Q9UBS4 358 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 PISDQ9UG56 409 aa14.53□□□□□ -0.08
SHMT2-232ENST00000557487 OR6C76A6NM76 312 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 TMEM14DPA8MWL7 114 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 VSIG8P0DPA2 414 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 LIPCP11150 499 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 AKR1C4P17516 323 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 ADCYAP1P18509 176 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 CBX5P45973 191 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 B2MP61769 119 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 PLCXD2Q0VAA5 305 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 UNC119Q13432 240 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 PLEKHN1Q494U1 663 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-232ENST00000557487 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 PRSS54Q6PEW0 395 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 KLHL24Q6TFL4 600 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 GPR119Q8TDV5 335 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 PAQR8Q8TEZ7 354 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 ASB10Q8WXI3 467 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 DAZLQ92904 295 aaKnown RBP14.52□□□□□ -0.09
SHMT2-232ENST00000557487 NKD1Q969G9 470 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 AQP10Q96PS8 301 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 GAL3ST4Q96RP7 486 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 RNF126Q9BV68 326 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 RTN4RQ9BZR6 473 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 MOB1AQ9H8S9 216 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 PDE7BQ9NP56 450 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 CYTL1Q9NRR1 136 aa14.52□□□□□ -0.09
SHMT2-232ENST00000557487 TMEM184BQ9Y519 407 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-232ENST00000557487 NPIPA5E9PKD4 350 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 P2RY10O00398 339 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 TAAR5O14804 337 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 PRKNO60260 465 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-232ENST00000557487 SFT2D2O95562 160 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 ACTL6AO96019 429 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 IFNA4P05014 189 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 NR0B1P51843 470 aaKnown RBP14.51□□□□□ -0.09
SHMT2-232ENST00000557487 ARHGDIBP52566 201 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 GUCA2BQ16661 112 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 H3F3CQ6NXT2 135 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 ADAD2Q8NCV1 583 aaKnown RBP14.51□□□□□ -0.09
SHMT2-232ENST00000557487 OR4K15Q8NH41 348 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 NUDCD2Q8WVJ2 157 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 FGGYQ96C11 551 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 NKX3-1Q99801 234 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-232ENST00000557487 IFT22Q9H7X7 185 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms