RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CCR2P41597 374 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 KIR3DL2P43630 455 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 YAP1P46937 504 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CDK9P50750 372 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TPMTP51580 245 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 PRKXP51817 358 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TAS2R60P59551 318 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 IGLV3-21P80748 117 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 XIAPP98170 497 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OC90Q02509 493 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CYP24A1Q07973 514 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SELENBP1Q13228 472 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 C1orf61Q13536 156 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SMCO1Q147U7 214 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 KIAA0040Q15053 153 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OXA1LQ15070 435 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CDK10Q15131 360 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 KLHL12Q53G59 568 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OR2B11Q5JQS5 317 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TTC33Q6PID6 262 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 MOB1BQ7L9L4 216 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 LINC00523Q86TU6 105 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 C17orf82Q86X59 251 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SKA3Q8IX90 412 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 UBQLNLQ8IYU4 475 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 PDIK1LQ8N165 341 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 UBE2J2Q8N2K1 259 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 MREGQ8N565 214 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 C11orf42Q8N5U0 333 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 C12orf29Q8N999 325 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OR4D9Q8NGE8 314 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 DTD1Q8TEA8 209 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 PAQR8Q8TEZ7 354 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 MRPS31Q92665 395 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 UFD1Q92890 307 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 NTAN1Q96AB6 310 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CSPG4P5Q96PW8 444 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 P2RY13Q9BPV8 354 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 ECSITQ9BQ95 431 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF251Q9BRH9 671 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 COPS4Q9BT78 406 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 MROQ9BYG7 248 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SLITRK2Q9H156 845 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 ALX4Q9H161 411 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OR51B6Q9H340 312 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SMYD3Q9H7B4 428 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF702PQ9H963 129 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 WARS2Q9UGM6 360 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 RPH3ALQ9UNE2 315 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 NEUROG3Q9Y4Z2 214 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 FAM208BQ5VWN6 2430 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 FANCMQ8IYD8 2048 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TRAV19A0A0A6YYK7 116 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 FAM92AA1XBS5 289 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 A8MXQ7 604 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 SLC31A2O15432 143 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 RS1O15537 224 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 AKR7A2O43488 359 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CST8O60676 142 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 EIF1BO60739 113 aaKnown RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CSTAP01040 98 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 SMIM6P0DI80 62 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 PNMTP11086 282 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CCDC130P13994 396 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 TNNI1P19237 187 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CSRP1P21291 193 aaKnown RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 LEPP41159 167 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 EIF1P41567 113 aaKnown RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 KIR2DS2P43631 304 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 MED21Q13503 144 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 ELAVL3Q14576 367 aaKnown RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 PON3Q15166 354 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 RNF212Q495C1 297 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 OLFML2AQ68BL7 652 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 TMEM225Q6GV28 225 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 PMF1Q6P1K2 205 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 HORMAD1Q86X24 394 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 KIF2BQ8N4N8 673 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 DEFB119Q8N690 84 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 OR5T1Q8NG75 326 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 OR8J2Q8NGG1 315 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 TNFRSF14Q92956 283 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 STMN2Q93045 179 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CPNE4Q96A23 557 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CAPZA3Q96KX2 299 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 IL4I1Q96RQ9 567 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 KIFC1Q9BW19 673 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 CHID1Q9BWS9 393 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 RACGAP1Q9H0H5 632 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 MAGT1Q9H0U3 335 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 OR51M1Q9H341 326 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 APMAPQ9HDC9 416 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms