RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ATP6V1HQ9UI12 483 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZNF490Q9ULM2 529 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 NDRG2Q9UN36 371 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 EIF3LQ9Y262 564 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 RNF11Q9Y3C5 154 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 TIMM22Q9Y584 194 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CACNA1GO43497 2377 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 DNAJC13O75165 2243 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 WDFY4Q6ZS81 3184 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CEP250Q9BV73 2442 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 A0A096LPI6 279 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 IGKV1-8A0A0C4DH67 115 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 A0A0U1RRA0 63 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 RNF103-CHMP3A0A140T963 221 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PDZK1P1A8MUH7 402 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 C2orf74A8MZ97 194 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 H0YHG0 523 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TXNDC9O14530 226 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MRASO14807 208 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ANGPT2O15123 496 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SCAMP2O15127 329 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 TOX3O15405 576 aaPredicted RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 SCN2BO60939 215 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PEX11AO75192 247 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SEC22BO75396 215 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 CIB2O75838 187 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MYO1DO94832 1006 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ALPPP05187 535 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SMIM10L1P0DMW3 83 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ALPPL2P10696 532 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 BCKDHAP12694 445 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 RPS2P15880 293 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 TSPAN8P19075 237 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PPIBP23284 216 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 ME2P23368 584 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 HTR1EP28566 365 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PTPN6P29350 595 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 IL12AP29459 219 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PBLDP30039 288 aaPredicted RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 CMPK1P30085 196 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PEBP1P30086 187 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 MAT2AP31153 395 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 HPCAL1P37235 193 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ACTR1BP42025 376 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SLC6A8P48029 635 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 NUDT2P50583 147 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ACTR1AP61163 376 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 STXBP1P61764 594 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 RPL38P63173 70 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 SKP1P63208 163 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 KCNJ2P63252 427 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 CSNK1G2P78368 415 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SRYQ05066 204 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TGM3Q08188 693 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 FADDQ13158 208 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ART3Q13508 389 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 EIF2B1Q14232 305 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 CEBPEQ15744 281 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 AGKQ53H12 422 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 FBXO48Q5FWF7 155 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 AP1ARQ63HQ0 302 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 LCN8Q6JVE9 175 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 NOXRED1Q6NXP6 359 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SPESP1Q6UW49 350 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 WDR88Q6ZMY6 472 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TMEM26Q6ZUK4 368 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 COMMD6Q7Z4G1 85 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 P4HA3Q7Z4N8 544 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TMEM179BQ7Z7N9 219 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 PAQR7Q86WK9 346 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 OOSP2Q86WS3 158 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SLC30A8Q8IWU4 369 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 DEFB107AQ8IZN7 70 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ZCCHC7Q8N3Z6 543 aaKnown RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 MFSD9Q8NBP5 474 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ZBTB44Q8NCP5 570 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 OR52E1Q8NGJ3 308 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 NT5CQ8TCD5 201 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 AGR3Q8TD06 166 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ZNF721Q8TF20 911 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 NAT14Q8WUY8 206 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 LCN9Q8WX39 176 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 GTF2H4Q92759 462 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 KLK6Q92876 244 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 DLX4Q92988 240 aaPredicted RBP2.44□□□□□ -2.02
VRK1-207ENST00000557352 TMEM186Q96B77 213 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 LRRC58Q96CX6 371 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 RCN3Q96D15 328 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TM4SF19Q96DZ7 209 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 MED8Q96G25 268 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 SMIM10Q96HG1 83 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 ZBTB18Q99592 522 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 CGREF1Q99674 301 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 CENPKQ9BS16 269 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 TBCDQ9BTW9 1192 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 DPY30Q9C005 99 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 Q9H3A6 140 aa2.44□□□□□ -2.02
VRK1-207ENST00000557352 RMND5AQ9H871 391 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms