RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR13G1Q8NGZ3 307 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 OR2T4Q8NH00 348 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 HAVCR1Q96D42 359 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 TSSK2Q96PF2 358 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 GPA33Q99795 319 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 RACGAP1Q9H0H5 632 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 MAGIXQ9H6Y5 334 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 ZNF665Q9H7R5 613 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 REEP1Q9H902 201 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 UBAP1Q9NZ09 502 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 IL19Q9UHD0 177 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 KLHL21Q9UJP4 597 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 PURGQ9UJV8 347 aaKnown RBP6.22□□□□□ -1.41
SCFD1-222ENST00000556768 PRPF19Q9UMS4 504 aaKnown RBP6.22□□□□□ -1.41
SCFD1-222ENST00000556768 PPP1R3CQ9UQK1 317 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 ARFGEF3Q5TH69 2177 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 LRRC30A6NM36 301 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 F5H5K5 113 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 IFNL4K9M1U5 179 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 TCF21O43680 179 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 IFNGP01579 166 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 SEMG1P04279 462 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 KITLGP21583 273 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 GATA3P23771 443 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 GSSP48637 474 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 TPTEP56180 551 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 GK3PQ14409 553 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 AVPI1Q5T686 147 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 ZNF620Q6ZNG0 422 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 RINLQ6ZS11 566 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 SPICQ8N5J4 248 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 OR4C15Q8NGM1 316 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 SPTSSAQ969W0 71 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 COQ7Q99807 217 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 FUZQ9BT04 418 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 SOX7Q9BT81 388 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 TEX12Q9BXU0 123 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 IL20Q9NYY1 176 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 KCNG2Q9UJ96 466 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 STARD10Q9Y365 291 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 NOP16Q9Y3C1 178 aaKnown RBP6.22□□□□□ -1.41
SCFD1-222ENST00000556768 SAMHD1Q9Y3Z3 626 aaKnown RBP6.22□□□□□ -1.41
SCFD1-222ENST00000556768 WIPI2Q9Y4P8 454 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 LYVE1Q9Y5Y7 322 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 CDH10Q9Y6N8 788 aa6.22□□□□□ -1.41
SCFD1-222ENST00000556768 ZSCAN5BA6NJL1 495 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 LCE2BO14633 110 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 TUSC2O75896 110 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 PNPP00491 289 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 CD55P08174 381 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SBK2P0C263 348 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SLC6A9P48067 706 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SRP9P49458 86 aaKnown RBP6.21□□□□□ -1.42
SCFD1-222ENST00000556768 BLVRAP53004 296 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 RAD23AP54725 363 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 FXYD6P3P58550 94 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 LMO4P61968 165 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCFD1-222ENST00000556768 COX10Q12887 443 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 TAF13Q15543 124 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 MICAQ29983 383 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 CCDC92Q53HC0 331 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-222ENST00000556768 OR2T5Q6IEZ7 315 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 PGBD2Q6P3X8 592 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 CORO6Q6QEF8 472 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 RASSF6Q6ZTQ3 369 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 AQP11Q8NBQ7 271 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SDR9C7Q8NEX9 313 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SLC26A10Q8NG04 563 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 OR2T33Q8NG76 320 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 OR2T29Q8NH02 315 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 PPP1R35Q8TAP8 253 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 SLC7A6Q92536 515 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 ASB9Q96DX5 294 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 ATF6BQ99941 703 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 C1orf21Q9H246 121 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 YY1AP1Q9H869 796 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF556Q9HAH1 456 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 TBC1D23Q9NUY8 699 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 CYB5R1Q9UHQ9 305 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 BAIAP2Q9UQB8 552 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 U3KQV3 271 aa6.21□□□□□ -1.42
SCFD1-222ENST00000556768 IGLV1-36A0A0B4J1U3 117 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR6C68A6NDL8 312 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 RIIAD1A6NNX1 92 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 J3QLI3 93 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 DCTN6O00399 190 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 GYG2O15488 501 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 FOXH1O75593 365 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 GASTP01350 101 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 LCATP04180 440 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 DBHP09172 617 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 RAP2AP10114 183 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OSMP13725 252 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 IRF2P14316 349 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF3P17036 446 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 FMO3P31513 532 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 MAGEA2P43356 314 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 SLC15A1P46059 708 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms