RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ZNF442Q9H7R0 627 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 ACOT13Q9NPJ3 140 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 TRIM36Q9NQ86 728 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 G6PC2Q9NQR9 355 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 BABAM2Q9NXR7 383 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 RAI1Q7Z5J4 1906 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 PLCE1Q9P212 2302 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 NBPF19A0A087WUL8 3843 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 TMEM269A0A1B0GVZ9 245 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 LOC390937A0A1W2PQ73 354 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 C5orf49A4QMS7 147 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 DHRS7CA6NNS2 312 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 M0R1B8 84 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 XRCC2O43543 280 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 SMPD2O60906 423 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ISG15P05161 165 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 CD3EP07766 207 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ATP6V1B1P15313 513 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 JUNBP17275 347 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 NR4A1P22736 598 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 GLRXP35754 106 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 WNT5AP41221 380 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 UCP2P55851 309 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF121P58317 390 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 GALK2Q01415 458 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 EMX1Q04741 257 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 HGFACQ04756 655 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 BSPH1Q075Z2 132 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 MLLT11Q13015 90 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 TP53I3Q53FA7 332 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 CATSPERDQ86XM0 798 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ELMOD2Q8IZ81 293 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF283Q8N7M2 679 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 OR2G2Q8NGZ5 317 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 SPRYD4Q8WW59 207 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 SGCDQ92629 289 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 RORBQ92753 470 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 VCX3AQ9NNX9 186 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ACOXLQ9NUZ1 547 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 CLEC2DQ9UHP7 191 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 GNG8Q9UK08 70 aa9.73□□□□□ -0.85
FOXN3-212ENST00000556541 SPTAN1Q13813 2472 aaKnown RBP9.73□□□□□ -0.85
FOXN3-212ENST00000556541 ICE1Q9Y2F5 2266 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 TMEM212A6NML5 194 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 A6NNC1 897 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 F5H5K5 113 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 LOC110117498-PIK3R3F6TDL0 507 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 J3QLW9 94 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 SIAH2O43255 324 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 PLPP2O43688 288 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 GPRIN2O60269 458 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 DBHP09172 617 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 UBCP0CG48 685 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF19P17023 458 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 CCL1P22362 96 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 CALCRP30988 508 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 EVX1P49640 407 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 TPBGQ13641 420 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ALKBH1Q13686 389 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 CDK5R1Q15078 307 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 SYT6Q5T7P8 510 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 OR2G6Q5TZ20 316 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 MBNL2Q5VZF2 373 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 DMKNQ6E0U4 476 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 FBXW12Q6X9E4 464 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF704Q6ZNC4 412 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 PAQR4Q8N4S7 273 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 THRSPQ92748 146 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 C14orf79Q96F83 325 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 PLPPR2Q96GM1 343 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 MRPS26Q9BYN8 205 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 CCDC90BQ9GZT6 254 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 OR10A2Q9H208 303 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ISG20L2Q9H9L3 353 aaKnown RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 ST6GALNAC2Q9UJ37 374 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 OR52A1Q9UKL2 312 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 RNF115Q9Y4L5 304 aa9.72□□□□□ -0.85
FOXN3-212ENST00000556541 USP9YO00507 2555 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-212ENST00000556541 OR4C45A6NMZ5 311 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 VSTM5A8MXK1 200 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 SHISA9B4DS77 424 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 ABCD4O14678 606 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 PNPP00491 289 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 SMIM18P0DKX4 95 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 RAC2P15153 192 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 ZNF250P15622 560 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 ZNF12P17014 697 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 PRKXP51817 358 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 PPP1CBP62140 327 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 TRAM1Q15629 374 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 BCL2L15Q5TBC7 163 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 ZBTB37Q5TC79 503 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 TMEM244Q5VVB8 128 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 XAF1Q6GPH4 301 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 ZNF101Q8IZC7 436 aa9.71□□□□□ -0.86
FOXN3-212ENST00000556541 OR8B12Q8NGG6 310 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms