RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 FANK1Q8TC84 345 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 SLCO4A1Q96BD0 722 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 NEIL1Q96FI4 390 aaPredicted RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 PITX2Q99697 317 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 CDADC1Q9BWV3 514 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MYLK2Q9H1R3 596 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 OR52D1Q9H346 318 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 UFSP2Q9NUQ7 469 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MRPL22Q9NWU5 206 aaKnown RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 KIR2DS1A0A191URI9 304 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 IFNL4K9M1U5 179 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ARPC3O15145 178 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 FAM20BO75063 409 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 GADD45GO95257 159 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 OMGP23515 440 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 SLC6A6P31641 620 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 PITPNBP48739 271 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 RAD23AP54725 363 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 SPIBQ01892 262 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 TRAP1Q12931 704 aaKnown RBP11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 CLEC12AQ5QGZ9 265 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 SLC35F1Q5T1Q4 408 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 BTNL3Q6UXE8 466 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ZNF841Q6ZN19 808 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 FITM2Q8N6M3 262 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 SDR9C7Q8NEX9 313 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ZNRF4Q8WWF5 429 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 MAP6Q96JE9 813 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
TGFB3-204ENST00000556285 NUDT16L1Q9BRJ7 211 aaKnown RBP11.07□□□□□ -0.64
TGFB3-204ENST00000556285 IFT27Q9BW83 186 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 HCAR1Q9BXC0 346 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 ADA2Q9NZK5 511 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 CYB5R1Q9UHQ9 305 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 TMCC3Q9ULS5 477 aa11.07□□□□□ -0.64
TGFB3-204ENST00000556285 SAMD4AQ9UPU9 718 aaKnown RBP11.07□□□□□ -0.64
TGFB3-204ENST00000556285 C22orf46C9J442 243 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 NDUFAB1O14561 156 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 RENP00797 406 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 LCATP04180 440 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 PPIAL4GP0DN37 164 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 MDKP21741 143 aaPredicted RBP11.06□□□□□ -0.64
TGFB3-204ENST00000556285 PYCR1P32322 319 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 GATA4P43694 442 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 FGF12P61328 243 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 SRSF4Q08170 494 aaKnown RBP11.06□□□□□ -0.64
TGFB3-204ENST00000556285 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 DEFB112Q30KQ8 113 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 SNAI3Q3KNW1 292 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 WDR25Q64LD2 544 aaPredicted RBP11.06□□□□□ -0.64
TGFB3-204ENST00000556285 PGM2L1Q6PCE3 622 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 ZBTB46Q86UZ6 589 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 OR8B3Q8NGG8 313 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 PYURFQ96I23 114 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 OR8B2Q96RD0 313 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 ATF6BQ99941 703 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 EGLN3Q9H6Z9 239 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 ZNF696Q9H7X3 374 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 ZMAT3Q9HA38 289 aaKnown RBP11.06□□□□□ -0.64
TGFB3-204ENST00000556285 SPAG4Q9NPE6 437 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 CTSZQ9UBR2 303 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 VWFP04275 2813 aa11.06□□□□□ -0.64
TGFB3-204ENST00000556285 TVP23AA6NH52 213 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 LRRC30A6NM36 301 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 CLDN34H7C241 214 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-204ENST00000556285 OR10H3O60404 316 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 FSTL3O95633 263 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 HLA-DQA2P01906 255 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 SFTPBP07988 381 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 CA6P23280 308 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 CD200P41217 278 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 MTNR1AP48039 350 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 GSSP48637 474 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 DEFA6Q01524 100 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 ZNF92Q03936 586 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.05□□□□□ -0.64
TGFB3-204ENST00000556285 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 SFRP4Q6FHJ7 346 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-204ENST00000556285 BOLLQ8N9W6 283 aaKnown RBP11.05□□□□□ -0.64
TGFB3-204ENST00000556285 CYB561A3Q8NBI2 242 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 OR2AJ1Q8NGZ0 328 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 OR2AE1Q8NHA4 323 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 Q8TCH9 128 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 DDOQ99489 341 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 RASSF4Q9H2L5 321 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
TGFB3-204ENST00000556285 KRCC1Q9NPI7 259 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-204ENST00000556285 CLN8Q9UBY8 286 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms