RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 YAE1D1Q9NRH1 226 aa12.91□□□□□ -0.34
ACTN1-217ENST00000556203 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
ACTN1-217ENST00000556203 CSPG4Q6UVK1 2322 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 INAFM1C9JVW0 142 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 PPIHO43447 177 aaKnown RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 LILRA1O75019 489 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CD55P08174 381 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 TACSTD2P09758 323 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 SLC2A1P11166 492 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 ANOS1P23352 680 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 NAA10P41227 235 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CRYBB2P43320 205 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 SLC15A1P46059 708 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CHN2P52757 468 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 TNFAIP6P98066 277 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 APOFQ13790 326 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 GK2Q14410 553 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 SNAI3Q3KNW1 292 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 SPRNQ5BIV9 151 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 C12orf73Q69YU5 71 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CYB5R2Q6BCY4 276 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 C10orf67Q8IYJ2 551 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 ZNF283Q8N7M2 679 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 RNF133Q8WVZ7 376 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 AMELYQ99218 206 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 RBM4BQ9BQ04 359 aaKnown RBP12.9□□□□□ -0.34
ACTN1-217ENST00000556203 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 RIBC2Q9H4K1 309 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 TREM2Q9NZC2 230 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 N6AMT1Q9Y5N5 214 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CACNG2Q9Y698 323 aa12.9□□□□□ -0.34
ACTN1-217ENST00000556203 CR1P17927 2039 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 C5orf63A6NC05 138 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 IQCF6A8MYZ5 107 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 SELEP16581 610 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 HOXB4P17483 251 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 TNFSF4P23510 183 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 HSD11B1P28845 292 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 POLR2IP36954 125 aaKnown RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 CX3CR1P49238 355 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 HFEQ30201 348 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 PGAP1Q75T13 922 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 MRPL21Q7Z2W9 205 aaKnown RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
ACTN1-217ENST00000556203 TCEANCQ8N8B7 351 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 ZNF454Q8N9F8 522 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 OR8G5Q8NG78 346 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 OTOSQ8NHW6 89 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 THEM6Q8WUY1 208 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 CCL17Q92583 94 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 GABARAPL3Q9BY60 117 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 TOR3AQ9H497 397 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 NARFLQ9H6Q4 476 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
ACTN1-217ENST00000556203 LYNP07948 512 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
ACTN1-217ENST00000556203 IL2RGP31785 369 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 OPRL1P41146 370 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 GZMKP49863 264 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 EFNB1P98172 346 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 GLYATL3Q5SZD4 288 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 OR13G1Q8NGZ3 307 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 OR2AE1Q8NHA4 323 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 IL4I1Q96RQ9 567 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 TEAD3Q99594 435 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 DNAJC27Q9NZQ0 273 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
ACTN1-217ENST00000556203 A8MV72 311 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-217ENST00000556203 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 EI24O14681 340 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 WNT9BO14905 357 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 TBX1O43435 398 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 ANXA2P07355 339 aaKnown RBP12.87□□□□□ -0.35
ACTN1-217ENST00000556203 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 MVKQ03426 396 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 ZNF92Q03936 586 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
ACTN1-217ENST00000556203 AVPI1Q5T686 147 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 RHOUQ7L0Q8 258 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 OR10AD1Q8NGE0 317 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 SPRYD4Q8WW59 207 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-217ENST00000556203 ITLN1Q8WWA0 313 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 HPS1Q92902 700 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 MSI2Q96DH6 328 aaKnown RBP12.87□□□□□ -0.35
ACTN1-217ENST00000556203 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 SOX7Q9BT81 388 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 TMEM100Q9NV29 134 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 H2AFY2Q9P0M6 372 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms