RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PQLC3Q8N755 202 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR9G4Q8NGQ1 327 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZYG11BQ9C0D3 744 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 TMEM9BQ9NQ34 198 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 CTSFQ9UBX1 484 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNFX1Q9P2E3 1918 aaKnown RBP3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 LRP5O75197 1615 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 TRPM1Q7Z4N2 1603 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 CRB1P82279 1406 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 BCL9LQ86UU0 1499 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 ITSN1Q15811 1721 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 FMN2Q9NZ56 1722 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 A0A1W2PP18 115 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 BCHEP06276 602 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 GGT1P19440 569 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 NCCRP1Q6ZVX7 275 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 MICU2Q8IYU8 434 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 CYB561D1Q8N8Q1 229 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 BPIFCQ8NFQ6 507 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 STARD4Q96DR4 205 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF681Q96N22 645 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 IQCGQ9H095 443 aaKnown RBP3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 NCOR1P1Q9H4R4 102 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 RETNQ9HD89 108 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 MRPS30Q9NP92 439 aaKnown RBP3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 RABL2AQ9UBK7 228 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 SAR1BQ9Y6B6 198 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 SLIT2O94813 1529 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 MAP3K19Q56UN5 1328 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 PCDH11XQ9BZA7 1347 aa3.37□□□□□ -1.87
CKS1BP1-201ENST00000555221 SHPRHQ149N8 1683 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 OVOS2A0A0G2JMS6 1433 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 OVOS2A0A0J9YW53 1432 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 ATRNO75882 1429 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 OVOS2Q6IE36 1432 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 NSD3Q9BZ95 1437 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGLV1-50A0A075B6I6 118 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 KCNE1BA0A087WTH5 132 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGHV5-10-1A0A0J9YXX1 117 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 LRRIQ4A6NIV6 560 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 RAD51CO43502 376 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 ENTPD5O75356 428 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 RP2O75695 350 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 AQP8O94778 261 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF823P16415 610 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 PGAM1P18669 254 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 GSTM3P21266 225 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 TNFSF9P41273 254 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 PFN3P60673 137 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 C16orf72Q14CZ0 275 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 WDR43Q15061 677 aaKnown RBP eCLIP3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 PON2Q15165 354 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 IRF4Q15306 451 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 RGNQ15493 299 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 BEX5Q5H9J7 111 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 C1orf185Q5T7R7 199 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 GPR107Q5VW38 600 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 METTL21CQ5VZV1 264 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 STUMQ69YW2 141 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 NPSR1Q6W5P4 371 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 FBXW12Q6X9E4 464 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 PGAM4Q8N0Y7 254 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR5W2Q8NH69 310 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 MRGPRFQ96AM1 343 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 TEKT3Q9BXF9 490 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 ANKRD60Q9BZ19 345 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 UCK2Q9BZX2 261 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 SAV1Q9H4B6 383 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 HMG20AQ9NP66 347 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 MRPL22Q9NWU5 206 aaKnown RBP3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 TBC1D24Q9ULP9 559 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 MROH7-TTC4A0A0A0MT08 1334 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 NHSL1Q5SYE7 1610 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 NALCNQ8IZF0 1738 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 BCL9O00512 1426 aa3.36□□□□□ -1.87
CKS1BP1-201ENST00000555221 XIRP1Q702N8 1843 aaKnown RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 ABCC6O95255 1503 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGLV1-36A0A0B4J1U3 117 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 A0A1B0GW55 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 H0YIV9 168 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 CDC40O60508 579 aaKnown RBP eCLIP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 IGKV3-11P04433 115 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 ASGR1P07306 291 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 UBTFL6P0CB48 400 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4L2P0CJ85 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4L3P0CJ86 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4L5P0CJ88 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4L6P0CJ89 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4L7P0CJ90 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR1E1P30953 314 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 UBE2NP61088 152 aaKnown RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 PTGES3Q15185 160 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms