RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 F5H5K5 113 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 TNFRSF13BO14836 293 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-207ENST00000555114 FAM20BO75063 409 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PTP4A3O75365 173 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 TOX4O94842 621 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 H1F0P07305 194 aaKnown RBP12.88□□□□□ -0.35
NEDD1-207ENST00000555114 MELTFP08582 738 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 CFHR2P36980 270 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PSMB10P40306 273 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PMELP40967 661 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 COX10Q12887 443 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 FGD3Q5JSP0 725 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
NEDD1-207ENST00000555114 OR2AJ1Q8NGZ0 328 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 SLC7A13Q8TCU3 470 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 DYRK2Q92630 601 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PITX2Q99697 317 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-207ENST00000555114 RNF7Q9UBF6 113 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 TMCC3Q9ULS5 477 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 ENPP4Q9Y6X5 453 aa12.88□□□□□ -0.35
NEDD1-207ENST00000555114 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 A0A1W2PRQ8 180 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 C22orf46C9J442 243 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 SLC22A2O15244 555 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 NDUFA2O43678 99 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 TXNDC12O95881 172 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 RENP00797 406 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 SERPINA1P01009 418 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 LCATP04180 440 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 LIPEQ05469 1076 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
NEDD1-207ENST00000555114 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 DGCR6Q14129 220 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 GK2Q14410 553 aaPredicted RBP12.87□□□□□ -0.35
NEDD1-207ENST00000555114 OR8G1Q15617 311 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 MEP1BQ16820 701 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 PTCHD4Q6ZW05 846 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 FAM162AQ96A26 154 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 RCN3Q96D15 328 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 ATF6BQ99941 703 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 UFSP2Q9NUQ7 469 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
NEDD1-207ENST00000555114 UNC119BA6NIH7 251 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 LGALS8O00214 317 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 NDUFAB1O14561 156 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 SFTPBP07988 381 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
NEDD1-207ENST00000555114 CDKN2AP42771 156 aaKnown RBP12.86□□□□□ -0.35
NEDD1-207ENST00000555114 TPTEP56180 551 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 OR8B8Q15620 311 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 CLEC12AQ5QGZ9 265 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 HDXQ7Z353 690 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 PLPP7Q8NBV4 271 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 SCCPDHQ8NBX0 429 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 LRTOMTQ8WZ04 291 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 SLCO4A1Q96BD0 722 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 ERMAPQ96PL5 475 aaPredicted RBP12.86□□□□□ -0.35
NEDD1-207ENST00000555114 B9D1Q9UPM9 204 aa12.86□□□□□ -0.35
NEDD1-207ENST00000555114 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 IMPA2O14732 288 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 ADAM20O43506 726 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 GMDSO60547 372 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 HLA-DQA2P01906 255 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 RHCEP18577 417 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 SLC6A6P31641 620 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 GGT2P36268 569 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 OMPP47874 163 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 RELBQ01201 579 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 TRAP1Q12931 704 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 KRT72Q14CN4 511 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 KRTAP27-1Q3LI81 207 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 SPERTQ8NA61 448 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 C19orf18Q8NEA5 215 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 RP9Q8TA86 221 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 FANK1Q8TC84 345 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 TSSK2Q96PF2 358 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms