RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 C5orf63A6NC05 138 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 OR6C74A6NCV1 312 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 CDC40O60508 579 aaKnown RBP eCLIP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MPDU1O75352 247 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 FARS2O95363 451 aaKnown RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 CTDNEP1O95476 244 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 HPRT1P00492 218 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MBP02144 154 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF806P0C7X5 589 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 PMCHP20382 165 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 CFHR2P36980 270 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 RBM34P42696 430 aaKnown RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF121P58317 390 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 PRR3P79522 188 aaKnown RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 CYP24A1Q07973 514 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SYCNQ0VAF6 134 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SLC39A6Q13433 755 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 NCF4Q15080 339 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SMUG1Q53HV7 270 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF691Q5VV52 312 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MLIPQ5VWP3 458 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SAXO2Q658L1 398 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 NTM-AS1Q6ZSK4 140 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 APRG1Q8IVJ8 170 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 OR8U1Q8NH10 309 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SYNPRQ8TBG9 265 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 RGP1Q92546 391 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 NAT6Q93015 286 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 EXOSC8Q96B26 276 aaKnown RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SGTBQ96EQ0 304 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 C9orf72Q96LT7 481 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SCGB3A2Q96PL1 93 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 CSPG4P5Q96PW8 444 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SYNDIG1Q9H7V2 258 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 PATZ1Q9HBE1 687 aaKnown RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SLC38A10Q9HBR0 1119 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MYOZ1Q9NP98 299 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MYOZ2Q9NPC6 264 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 DYRK4Q9NR20 520 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 MCUBQ9NWR8 336 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 KPTNQ9Y664 436 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 SAR1BQ9Y6B6 198 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 NEURL4Q96JN8 1562 aa1.92□□□□□ -2.1
SCFD1-213ENST00000554776 KIF27Q86VH2 1401 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 GABRR3A8MPY1 467 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ANKRD65E5RJM6 399 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 NDUFC2-KCTD14E9PQ53 114 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 BOLA2-SMG1P6H3BVE0 249 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ERI3O43414 337 aaKnown RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 XRCC2O43543 280 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 HSBP1O75506 76 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 GCM2O75603 506 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 TGM6O95932 706 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 PTTG1O95997 202 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 CATP04040 527 aaKnown RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 CTSLP07711 333 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ADRA2AP08913 450 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 IGHV1-8P0DP01 117 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 DTYMKP23919 212 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 GGT2P36268 569 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 FABP6P51161 128 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 MNAT1P51948 309 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 CCNG1P51959 295 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 CLDN18P56856 261 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ESRRGP62508 458 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 RPL23P62829 140 aaKnown RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 LINC00483Q53H64 154 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 CAVIN4Q5BKX8 364 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 TFDP3Q5H9I0 405 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 FAM78AQ5JUQ0 283 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 FBXW9Q5XUX1 488 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 UNC93AQ86WB7 457 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF695Q8IW36 515 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 WDFY1Q8IWB7 410 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 LGI3Q8N145 548 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 OR5T3Q8NGG3 340 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 OR4A15Q8NGL6 344 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 TCP10LQ8TDR4 215 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 SEH1LQ96EE3 360 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF488Q96MN9 340 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 HSD17B10Q99714 261 aaKnown RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 NDFIP1Q9BT67 221 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 DEFB129Q9H1M3 183 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 RPP21Q9H633 154 aaKnown RBP1.91□□□□□ -2.1
SCFD1-213ENST00000554776 TMEM27Q9HBJ8 222 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 MED4Q9NPJ6 270 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 FBXO8Q9NRD0 319 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF355PQ9NSJ1 428 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 ADGRA3Q8IWK6 1321 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
SCFD1-213ENST00000554776 PALLDQ8WX93 1383 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TNIKQ9UKE5 1360 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TRAV19A0A0A6YYK7 116 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 IGHV1-69DA0A0B4J2H0 117 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 RAD51BO15315 384 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR8U9P0C7N5 309 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF32P17041 273 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 MSR1P21757 451 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 PAFAH1B2P68402 229 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF829Q3KNS6 432 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms