RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 C5orf58C9J3I9 102 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 RFXANKO14593 260 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 PROP1O75360 226 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 HIST1H2ABP04908 130 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 CST2P09228 141 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 FBP1P09467 338 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 IRF2P14316 349 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ETS2P15036 469 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 LBPP18428 481 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 PSMB10P40306 273 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 GUCA1AP43080 201 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-229ENST00000554672 EFNB2P52799 333 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 CDH12P55289 794 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 CTXN1P60606 82 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 PCBD1P61457 104 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 UFM1P61960 85 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ARF6P62330 175 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 KCNJ8Q15842 424 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 SGCAQ16586 387 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF74Q16587 644 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 C10orf128Q5T292 105 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 PGBD2Q6P3X8 592 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 LYPD2Q6UXB3 125 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 HIST3H2AQ7L7L0 130 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 HDDC2Q7Z4H3 204 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 IFT20Q8IY31 132 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 C4orf33Q8N1A6 199 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 BBS10Q8TAM1 723 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF420Q8TAQ5 688 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-229ENST00000554672 NRG4Q8WWG1 115 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 HIST1H2ACQ93077 130 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 RAB24Q969Q5 203 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ERGIC1Q969X5 290 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 R3HDM4Q96D70 268 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 TEX37Q96LM6 180 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 C16orf45Q96MC5 204 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF347Q96SE7 839 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 SEPHS2Q99611 448 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 OR2H1Q9GZK4 316 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 WNT5BQ9H1J7 359 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 CENPHQ9H3R5 247 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 SMURF2Q9HAU4 748 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 TPT1P8Q9HAU6 139 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 NANSQ9NR45 359 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 STX18Q9P2W9 335 aaKnown RBP3.95□□□□□ -1.78
ATXN3-229ENST00000554672 NDRG4Q9ULP0 352 aaKnown RBP3.95□□□□□ -1.78
ATXN3-229ENST00000554672 FOXJ3Q9UPW0 622 aa3.95□□□□□ -1.78
ATXN3-229ENST00000554672 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 A0A1W2PRG6 482 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 GMNCA6NCL1 334 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NDUFA2O43678 99 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 FMO6PO60774 539 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 TRMUO75648 421 aaKnown RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ANP32DO95626 131 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 CH25HO95992 272 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 IL6P05231 212 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NHLRC4P0CG21 123 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ZCCHC18P0CG32 403 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 COX5BP10606 129 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NR2C1P13056 603 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ACADSP16219 412 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 EEF1B2P24534 225 aaKnown RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 LAP3P28838 519 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 CDAP32320 146 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 PMELP40967 661 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 DAP3P51398 398 aaKnown RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NME5P56597 212 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 RGS8P57771 180 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NCALDP61601 193 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ERVK-25P63136 954 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 MELKQ14680 651 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NSUN5P1Q3KNT7 163 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 KLHL22Q53GT1 634 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 FAM201AQ5SY85 155 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 HHATQ5VTY9 493 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NXNQ6DKJ4 435 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF613Q6PF04 617 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 DHRS4L2Q6PKH6 230 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF788Q6ZQV5 615 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 C1orf122Q6ZSJ8 110 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 IGFN1Q86VF2 1251 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 MOGAT3Q86VF5 341 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 CALHM3Q86XJ0 350 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NDUFA11Q86Y39 141 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 KRT73Q86Y46 540 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 PDZD9Q8IXQ8 264 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 KLHDC1Q8N7A1 406 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 OR8G5Q8NG78 346 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 OR4C13Q8NGP0 309 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 OR11L1Q8NGX0 322 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 OR2T6Q8NHC8 308 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NSMAFQ92636 917 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 NABP1Q96AH0 204 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 PPP1R36Q96LQ0 422 aa3.94□□□□□ -1.78
ATXN3-229ENST00000554672 ZNF582Q96NG8 517 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms