RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SLC30A7Q8NEW0 376 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 OR4A4PQ8NGN8 299 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RELTQ969Z4 430 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 ZBTB8AQ96BR9 441 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 SEC22AQ96IW7 307 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 MESP1Q9BRJ9 268 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 PHF7Q9BWX1 381 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RAB33BQ9H082 229 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 MRM2Q9UI43 246 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 NOP16Q9Y3C1 178 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 IGHV1OR21-1A0A087WYE8 117 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 F8VVB4 439 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 F8VWA3 439 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 UPK3AO75631 287 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF44P15621 663 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 SDHAP31040 664 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 SLC25A1P53007 311 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 PLA2G7Q13093 441 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 AIMP2Q13155 320 aaKnown RBP10.96□□□□□ -0.65
SHMT2-207ENST00000553837 DHRS2Q13268 280 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 EBPQ15125 230 aaKnown RBP10.96□□□□□ -0.65
SHMT2-207ENST00000553837 C1orf189Q5VU69 101 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 TCEAL6Q6IPX3 200 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 REC114Q7Z4M0 266 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM229BQ8NBD8 167 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 ZC3H10Q96K80 434 aaKnown RBP10.96□□□□□ -0.65
SHMT2-207ENST00000553837 C2orf88Q9BSF0 95 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM231Q9H6L2 316 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 ACKR4Q9NPB9 350 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 RXFP3Q9NSD7 469 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 MMACHCQ9Y4U1 282 aa10.96□□□□□ -0.65
SHMT2-207ENST00000553837 MEIS3P1A6NDR6 274 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 PIAS2O75928 621 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 FARS2O95363 451 aaKnown RBP10.96□□□□□ -0.66
SHMT2-207ENST00000553837 ABHD16AO95870 558 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 TXNDC12O95881 172 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 WNT11O96014 354 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 CD74P04233 296 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 BCKDHBP21953 392 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 RBP2P50120 134 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.66
SHMT2-207ENST00000553837 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 GFOD2Q3B7J2 385 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 SLC16A9Q7RTY1 509 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 OR1J2Q8NGS2 313 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF563Q8TA94 476 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF417Q8TAU3 575 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 NRIP2Q9BQI9 281 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 LAT2Q9GZY6 243 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 WDR76Q9H967 626 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 SEC61A2Q9H9S3 476 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 LHX6Q9UPM6 363 aa10.96□□□□□ -0.66
SHMT2-207ENST00000553837 UNC13CQ8NB66 2214 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF208O43345 1280 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 HCRTR2O43614 444 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 OR2T1O43869 369 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 TSPAN2O60636 221 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 SLC34A2O95436 690 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 MAS1P04201 325 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 AGAP20933 346 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 CSRP1P21291 193 aaKnown RBP10.95□□□□□ -0.66
SHMT2-207ENST00000553837 SOX2P48431 317 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 PPT1P50897 306 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 HSD11B2P80365 405 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 SMAD4Q13485 552 aaKnown RBP10.95□□□□□ -0.66
SHMT2-207ENST00000553837 PPA1Q15181 289 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 ATPAF1Q5TC12 328 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-207ENST00000553837 DRAM2Q6UX65 266 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 SLC25A45Q8N413 288 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 GPX8Q8TED1 209 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 C14orf79Q96F83 325 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 CCNL2Q96S94 520 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-207ENST00000553837 AMELYQ99218 206 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 FRRS1LQ9P0K9 344 aa10.95□□□□□ -0.66
SHMT2-207ENST00000553837 ATXN7L1Q9ULK2 861 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-207ENST00000553837 TRBV5-5A0A0J9YX44 114 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 TEX13DA0A0J9YY54 714 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF432O94892 652 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 HLA-AP01891 365 aaKnown RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 BGLAPP02818 100 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 MT-ND4LP03901 98 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 GIMD1P0DJR0 217 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 APEHP13798 732 aaKnown RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 NDUFB7P17568 137 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 ELAVL1Q15717 326 aaKnown RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 NSDHLQ15738 373 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 LANCL3Q6ZV70 420 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 FAM220AQ7Z4H9 259 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CDC20BQ86Y33 519 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CADM4Q8NFZ8 388 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 ADAD1Q96M93 576 aaKnown RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 FOXN4Q96NZ1 517 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 RHOFQ9HBH0 211 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 LAMP5Q9UJQ1 280 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms