RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC22A20A6NK97 555 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 SH2D1BO14796 132 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 CTNSO60931 367 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 ICOSLGO75144 302 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 EEDO75530 441 aaKnown RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 AQP8O94778 261 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 IFNB1P01574 187 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 APRTP07741 180 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 CT62P0C5K7 136 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 ATP5DP30049 168 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 SRP14P37108 136 aaKnown RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 MTTPP55157 894 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 CDKN2DP55273 166 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 HSD17B7P56937 341 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 HERV-K104P63124 156 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 REEP5Q00765 189 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 GK2Q14410 553 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 EBPQ15125 230 aaKnown RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 TIGD3Q6B0B8 471 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 ZNF470Q6ECI4 717 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 CLEC2AQ6UVW9 174 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 C10orf105Q8TEF2 133 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 C1orf54Q8WWF1 131 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 SLC5A11Q8WWX8 675 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 SLC39A3Q9BRY0 314 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 METTL17Q9H7H0 456 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 METTL7AQ9H8H3 244 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 NHEJ1Q9H9Q4 299 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-217ENST00000553287 NRN1Q9NPD7 142 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 ESM1Q9NQ30 184 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 ANO10Q9NW15 660 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 QPCTLQ9NXS2 382 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 CNIH4Q9P003 139 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 DPM3Q9P2X0 92 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 COPS7AQ9UBW8 275 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 SLC22A14Q9Y267 594 aa3.13□□□□□ -1.91
ATXN3-217ENST00000553287 EPPK1P58107 5090 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 UQCRHLA0A096LP55 91 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 IQANK1A0A1B0GTG1 560 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NCF1BA6NI72 391 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NCF1CA8MVU1 366 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 E7EQL1 145 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 CDC7O00311 574 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 EI24O14681 340 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 UGT2B11O75310 529 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 PDE5AO76074 875 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 SLC2A10O95528 541 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ACTL6AO96019 429 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 SERPINA6P08185 405 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 MPC1LP0DKB6 136 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NCF1P14598 390 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ZNF708P17019 499 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 USF1P22415 310 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 SLC1A2P43004 574 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 SLC1A1P43005 524 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 FUT7Q11130 342 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 EXOSC7Q15024 291 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 PON3Q15166 354 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 TRIP13Q15645 432 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 STK11Q15831 433 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NCMAPQ5T1S8 102 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 PRAMEF8Q5VWM4 474 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 TRIM40Q6P9F5 258 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 B3GLCTQ6Y288 498 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ADAMTSL5Q6ZMM2 481 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 RBM43Q6ZSC3 357 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 KCTD9Q7L273 389 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 PIWIL3Q7Z3Z3 882 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 LINC00523Q86TU6 105 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 THOC6Q86W42 341 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 IFNEQ86WN2 208 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 LRRC6Q86X45 466 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 STHQ8IWL8 128 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NAT8LQ8N9F0 302 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 OR8K3Q8NH51 312 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NUBPLQ8TB37 319 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 LRRC45Q96CN5 670 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 C11orf24Q96F05 449 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 KIR2DL4Q99706 377 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 C1QTNF6Q9BXI9 259 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 NXF5Q9H1B4 397 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ANKRA2Q9H9E1 313 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ISG20L2Q9H9L3 353 aaKnown RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 PARVBQ9HBI1 364 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 LPAR2Q9HBW0 351 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 CENPMQ9NSP4 180 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 IFNKQ9P0W0 207 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ZNF490Q9ULM2 529 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-217ENST00000553287 DHRS7Q9Y394 339 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 COL7A1Q02388 2944 aa3.12□□□□□ -1.91
ATXN3-217ENST00000553287 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
ATXN3-217ENST00000553287 IGLV8-61A0A075B6I0 122 aa3.11□□□□□ -1.91
ATXN3-217ENST00000553287 NPIPA5A0A0B4J1W7 369 aa3.11□□□□□ -1.91
ATXN3-217ENST00000553287 TMEM89A2RUT3 159 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms