RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FAM166AQ6J272 317 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 PLBD1Q6P4A8 553 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 RHOUQ7L0Q8 258 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF283Q8N7M2 679 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 LINC01356Q8N9X3 169 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 ATG16L2Q8NAA4 619 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 BBS1Q8NFJ9 593 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 REPIN1Q9BWE0 567 aaKnown RBP16.29■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF556Q9HAH1 456 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
PTCH1-227ENST00000553256 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 H0YL77 283 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 MITFO75030 526 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-227ENST00000553256 SPARCP09486 303 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 GSTT1P30711 240 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 TPTEP56180 551 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 PRSS12P56730 875 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 TNFAIP6P98066 277 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-227ENST00000553256 DRAM2Q6UX65 266 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 DPY19L4Q7Z388 723 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 CPOQ8IVL8 374 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 OR6K6Q8NGW6 343 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 LRTOMTQ8WZ04 291 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 KCNJ15Q99712 375 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 ABHD6Q9BV23 337 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 EGLN1Q9GZT9 426 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 TREM2Q9NZC2 230 aa16.28■□□□□ 0.2
PTCH1-227ENST00000553256 COL6A5A8TX70 2615 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 CCDC182A6NF36 153 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 PRODHO43272 600 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 TGFAP01135 160 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 LCATP04180 440 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 FASP25445 335 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 OPRL1P41146 370 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 ACTR3P61158 418 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF92Q03936 586 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 PTGES3Q15185 160 aaKnown RBP16.27■□□□□ 0.2
PTCH1-227ENST00000553256 HFEQ30201 348 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 AVPI1Q5T686 147 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 AMIGO2Q86SJ2 522 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 OR5AS1Q8N127 324 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 OR2Z1Q8NG97 314 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 ITLN1Q8WWA0 313 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 SPTSSAQ969W0 71 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 ZMYND19Q96E35 227 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-227ENST00000553256 INTS14Q96SY0 518 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 CDC42EP3Q9UKI2 254 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 KLHDC2Q9Y2U9 406 aa16.27■□□□□ 0.2
PTCH1-227ENST00000553256 ZAR1LA6NP61 321 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF878C9JN71 531 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 PRR23D1E9PI22 279 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-227ENST00000553256 H3BNX3 289 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 PTBP3O95758 552 aaKnown RBP16.26■□□□□ 0.19
PTCH1-227ENST00000553256 IGHV2-70P01814 119 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 IGHV2-5P01817 119 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 PRR23D2P0DMB1 279 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-227ENST00000553256 DVL1P1P54792 670 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-227ENST00000553256 ESRRGP62508 458 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 MVKQ03426 396 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 SLC35D3Q5M8T2 416 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 GLYATL3Q5SZD4 288 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 FAM120AOSQ5T036 256 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 OR13G1Q8NGZ3 307 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 OTOSQ8NHW6 89 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 CCL17Q92583 94 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 OR2V2Q96R30 315 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 OR51V1Q9H2C8 321 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 NARFLQ9H6Q4 476 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 GCM1Q9NP62 436 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 TMEM106BQ9NUM4 274 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF319Q9P2F9 582 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 KCNS2Q9ULS6 477 aa16.26■□□□□ 0.19
PTCH1-227ENST00000553256 B4DSR2 109 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 E9PQ18 207 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 G3V2T6 193 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 PRKYO43930 277 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 SELENOFO60613 162 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 FAM157CP0CG43 387 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 PMELP40967 661 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 PRKXP51817 358 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 RAD23AP54725 363 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 MAB21L1Q13394 359 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 CHRFAM7AQ494W8 412 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 SLX4IPQ5VYV7 408 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 C12orf73Q69YU5 71 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 ERI1Q8IV48 349 aaKnown RBP16.25■□□□□ 0.19
PTCH1-227ENST00000553256 OR10AD1Q8NGE0 317 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 OR6N2Q8NGY6 317 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 OR2AE1Q8NHA4 323 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 MEGF10Q96KG7 1140 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF582Q96NG8 517 aaPredicted RBP16.25■□□□□ 0.19
PTCH1-227ENST00000553256 COPS4Q9BT78 406 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF665Q9H7R5 613 aa16.25■□□□□ 0.19
PTCH1-227ENST00000553256 DYSFO75923 2080 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 PRR32B1ATL7 298 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 TPD52L2O43399 206 aaKnown RBP16.24■□□□□ 0.19
PTCH1-227ENST00000553256 SLC2A1P11166 492 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 SELEP16581 610 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms