RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TMED1Q13445 227 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 TRIP10Q15642 601 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 ALKBH6Q3KRA9 238 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 ZIK1Q3SY52 487 aaPredicted RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 BCDIN3DQ7Z5W3 292 aaKnown RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 ZCCHC24Q8N2G6 241 aaKnown RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 PACRGLQ8N7B6 248 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 C10orf105Q8TEF2 133 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 TRUB1Q8WWH5 349 aaKnown RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 FAM168AQ92567 244 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 RFKQ969G6 155 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 HAVCR1Q96D42 359 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 MNTQ99583 582 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 OPA3Q9H6K4 179 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 ADGRL4Q9HBW9 690 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 CENPMQ9NSP4 180 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 SMPD3Q9NY59 655 aaPredicted RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 PTTG3PQ9NZH4 202 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 WARS2Q9UGM6 360 aaKnown RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 LAMP5Q9UJQ1 280 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 PURGQ9UJV8 347 aaKnown RBP10□□□□□ -0.81
TRAFD1-209ENST00000552896 KLHDC2Q9Y2U9 406 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 TMEM14AQ9Y6G1 99 aa10□□□□□ -0.81
TRAFD1-209ENST00000552896 ZSCAN5BA6NJL1 495 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 H7C1Q1 480 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 PHYHO14832 338 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 CASQ2O14958 399 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 NCR1O76036 304 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 H2BFMP0C1H6 154 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 DAOP14920 347 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SLC25A16P16260 332 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SELEP16581 610 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ALOX5APP20292 161 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 PEX2P28328 305 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 PDLIM4P50479 330 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF81P51508 661 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 PSMA6P60900 246 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ELF3P78545 371 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 MRPS11P82912 194 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 TNK1Q13470 666 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 HLXQ14774 488 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SNAI3Q3KNW1 292 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 FAM209AQ5JX71 171 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SLC25A30Q5SVS4 291 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 KCTD18Q6PI47 426 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 SPATC1Q76KD6 591 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF283Q8N7M2 679 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ASB17Q8WXJ9 295 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 C18orf12Q96KH6 178 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF582Q96NG8 517 aaPredicted RBP9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 DIRC2Q96SL1 478 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 RHNO1Q9BSD3 238 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 DCLRE1BQ9H816 532 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 NIPAL2Q9H841 368 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 DNAJC27Q9NZQ0 273 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ZDHHC8Q9ULC8 765 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 GMPPBQ9Y5P6 360 aa9.99□□□□□ -0.81
TRAFD1-209ENST00000552896 ABCA1O95477 2261 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 IGHV4-30-2A0A087WSY4 118 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 LOC390937A0A1W2PQ73 354 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 IQCF6A8MYZ5 107 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 XRCC2O43543 280 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 MPZL2O60487 215 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 IGHV1-46P01743 117 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 CD55P08174 381 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 GIFP27352 417 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 PRKXP51817 358 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 ROM1Q03395 351 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 OGFRL1Q5TC84 451 aaPredicted RBP9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 MEDAGQ5VYS4 303 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 DEGS2Q6QHC5 323 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 MRPL21Q7Z2W9 205 aaKnown RBP9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 NAA40Q86UY6 237 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 LURAP1LQ8IV03 231 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF786Q8N393 782 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 UBASH3BQ8TF42 649 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 THEM6Q8WUY1 208 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 CMBLQ96DG6 245 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 SP140LQ9H930 580 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 CLN6Q9NWW5 311 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 LRP12Q9Y561 859 aa9.98□□□□□ -0.81
TRAFD1-209ENST00000552896 A0A096LNT2 108 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 LOC100130705A0A1B0GUX0 176 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 VWC2LB2RUY7 222 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF670-ZNF695F2Z2N8 137 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 DLGAP1O14490 977 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 SLC16A6O15403 523 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 ZNF254O75437 659 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 HPXP02790 462 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 ANXA2P07355 339 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 INHBBP09529 407 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 SBK2P0C263 348 aa9.97□□□□□ -0.81
TRAFD1-209ENST00000552896 SLC2A1P11166 492 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms