RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 PPP1CBP62140 327 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 GRB2P62993 217 aaKnown RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 IL5RAQ01344 420 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 ROM1Q03395 351 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 RAB40BQ12829 278 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 SNAI3Q3KNW1 292 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 SPATA46Q5T0L3 261 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 LAIR2Q6ISS4 152 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 DRAM2Q6UX65 266 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 LRRN1Q6UXK5 716 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 FBXW12Q6X9E4 464 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 NAA40Q86UY6 237 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 C1orf174Q8IYL3 243 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 CNIH3Q8TBE1 160 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 PIGTQ969N2 578 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 APOBEC3DQ96AK3 386 aaPredicted RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 MRPL48Q96GC5 212 aaKnown RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 OR8B4Q96RC9 309 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 DOK1Q99704 481 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 KCNJ15Q99712 375 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 SYT3Q9BQG1 590 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 CACNG6Q9BXT2 260 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 YTHDF1Q9BYJ9 559 aaKnown RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 TTTY10Q9BZA0 68 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 OR2J1Q9GZK6 312 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 CXorf56Q9H5V9 222 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 ELOVL3Q9HB03 270 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 INPP5EQ9NRR6 644 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 MRPS18AQ9NVS2 196 aaKnown RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 H2AFY2Q9P0M6 372 aaPredicted RBP7.82□□□□□ -1.16
CCDC59-207ENST00000552606 LAMP5Q9UJQ1 280 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 GRIP1Q9Y3R0 1128 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 CMAHPQ9Y471 501 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 LRP12Q9Y561 859 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 PCDHGB1Q9Y5G3 927 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 DYSFO75923 2080 aa7.82□□□□□ -1.16
CCDC59-207ENST00000552606 F5H5K5 113 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 MRPS14O60783 128 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SRSF10O75494 262 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 IGHA1P01876 353 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 LCKP06239 509 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SLC15A1P46059 708 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 CX3CR1P49238 355 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 TPTEP56180 551 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 KLF3P57682 345 aaPredicted RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 GABARAPL2P60520 117 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SNRPD2P62316 118 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF85Q03923 595 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 MED21Q13503 144 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 TESK1Q15569 626 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SMN1Q16637 294 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 C6orf52Q5T4I8 152 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF684Q5T5D7 378 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 ARL9Q6T311 187 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 UNQ6126/PRO20091Q6UXV3 157 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 LRRC75A-AS1Q8N1F1 130 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 KLF14Q8TD94 323 aaPredicted RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 HAVCR2Q8TDQ0 301 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SPTSSAQ969W0 71 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 LGALS12Q96DT0 336 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 RNFT2Q96EX2 444 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SORCS2Q96PQ0 1159 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 FOXC2Q99958 501 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF649Q9BS31 505 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 CENPMQ9NSP4 180 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 SLCO1C1Q9NYB5 712 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 EIF3KQ9UBQ5 218 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 EDARQ9UNE0 448 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 EXOGQ9Y2C4 368 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 STARD10Q9Y365 291 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 RPL36Q9Y3U8 105 aaKnown RBP7.81□□□□□ -1.16
CCDC59-207ENST00000552606 CCDC168Q8NDH2 2452 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
CCDC59-207ENST00000552606 NOTCH2Q04721 2471 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF469Q96JG9 3925 aaPredicted RBP7.8□□□□□ -1.16
CCDC59-207ENST00000552606 A0A1W2PQL4 384 aaPredicted RBP7.8□□□□□ -1.16
CCDC59-207ENST00000552606 EFCAB10A6NFE3 127 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF670-ZNF695F2Z2N8 137 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 M0R233 179 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 PSMD9O00233 223 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 NDUFS7O75251 213 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 FADS2O95864 444 aaKnown RBP7.8□□□□□ -1.16
CCDC59-207ENST00000552606 IGHV4-39P01824 125 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ADRA2AP08913 450 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 OR2T7P0C7T2 308 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 SLC2A1P11166 492 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 KITLGP21583 273 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 TUBG1P23258 451 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
CCDC59-207ENST00000552606 HSD11B1P28845 292 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 SLC6A9P48067 706 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 MMP15P51511 669 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 PRKXP51817 358 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ZNF121P58317 390 aaPredicted RBP7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ACTA2P62736 377 aa7.8□□□□□ -1.16
CCDC59-207ENST00000552606 ACTG2P63267 376 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms