RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TCF21O43680 179 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 MPZL1O95297 269 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 GPANK1O95872 356 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 CLPTM1O96005 669 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 MSR1P21757 451 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 ACHEP22303 614 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 MAGEB1P43366 347 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 SLC15A1P46059 708 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 CSNK2BP67870 215 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 MED21Q13503 144 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 SLC36A2Q495M3 483 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 TEX30Q5JUR7 227 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 LYPD4Q6UWN0 246 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 SLC16A14Q7RTX9 510 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 LRRC18Q8N456 261 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 OR6K6Q8NGW6 343 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 SNX33Q8WV41 574 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 RDH5Q92781 318 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 YIPF5Q969M3 257 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 ZMYND19Q96E35 227 aaPredicted RBP11.46□□□□□ -0.57
NUP188-211ENST00000550219 KCNG2Q9UJ96 466 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 RPL36Q9Y3U8 105 aaKnown RBP11.46□□□□□ -0.57
NUP188-211ENST00000550219 STAB1Q9NY15 2570 aa11.46□□□□□ -0.58
NUP188-211ENST00000550219 IQCMA0A1B0GVH7 501 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 B4DSR2 109 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 J3QRE1 110 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 WNT9BO14905 357 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 TPD52L2O43399 206 aaKnown RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 CDC14BO60729 498 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 CST2P09228 141 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 DBTP11182 482 aaKnown RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 CCNOP22674 350 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 GUCA1AP43080 201 aaPredicted RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 MTNR1AP48039 350 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 DVL1P1P54792 670 aaPredicted RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 KLF3P57682 345 aaPredicted RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 ZNF91Q05481 1191 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 ENDOGQ14249 297 aaKnown RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 SGCAQ16586 387 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 UGT2A3Q6UWM9 527 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 RFLNBQ8N5W9 214 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 WACQ9BTA9 647 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 ADGRL4Q9HBW9 690 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 TREM2Q9NZC2 230 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 EXOGQ9Y2C4 368 aaKnown RBP11.45□□□□□ -0.58
NUP188-211ENST00000550219 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
NUP188-211ENST00000550219 TVP23AA6NH52 213 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 FAM157AC9JC47 383 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 HLA-DQA2P01906 255 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 SBK2P0C263 348 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 PSKH1P11801 424 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 PCMT1P22061 227 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 APLNRP35414 380 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 ENTPD1P49961 510 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 SELENOVP59797 346 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 CCL8P80075 99 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 PLP2Q04941 152 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 POU4F2Q12837 409 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 MEP1BQ16820 701 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 AVPI1Q5T686 147 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 TMEM154Q6P9G4 183 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 SLC16A9Q7RTY1 509 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 DPPA2Q7Z7J5 298 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 SYT9Q86SS6 491 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 SYNPRQ8TBG9 265 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
NUP188-211ENST00000550219 LGALS12Q96DT0 336 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 RNFT2Q96EX2 444 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 INTS14Q96SY0 518 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 ZNF416Q9BWM5 594 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 METTL17Q9H7H0 456 aaPredicted RBP11.44□□□□□ -0.58
NUP188-211ENST00000550219 WDR76Q9H967 626 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 AMBNQ9NP70 447 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 EMC7Q9NPA0 242 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 FKBP14Q9NWM8 211 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 CYB5R1Q9UHQ9 305 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 PSORS1C1Q9UIG5 152 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 LRCH1Q9Y2L9 728 aa11.44□□□□□ -0.58
NUP188-211ENST00000550219 C17orf100A8MU93 164 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 SLC1A7O00341 560 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 ZNF593O00488 134 aaPredicted RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 XPNPEP2O43895 674 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 SELENOFO60613 162 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 RP2O75695 350 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 RGS9O75916 674 aaPredicted RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 PTHP01270 115 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 MSMBP08118 114 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 MMP7P09237 267 aaPredicted RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 PIPP12273 146 aaPredicted RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 ZNF823P16415 610 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 CRHBPP24387 322 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 HIST1H3AP68431 136 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms