RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZNF117Q03924 483 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 ZFP36L1Q07352 338 aaKnown RBP9.9□□□□□ -0.83
LINC00661-204ENST00000549354 PDCD1Q15116 288 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF74Q16587 644 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 DCXRQ7Z4W1 244 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 BPIFB2Q8N4F0 458 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 OR1J4Q8NGS1 313 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 PPP1R1CQ8WVI7 109 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 LIPHQ8WWY8 451 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 TMEM41AQ96HV5 264 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 SELENOIQ9C0D9 397 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 LAT2Q9GZY6 243 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 PTGES2Q9H7Z7 377 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 ACKR4Q9NPB9 350 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 COMMD9Q9P000 198 aa9.9□□□□□ -0.83
LINC00661-204ENST00000549354 KANTRA0A1W2PQU2 76 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 DISC1C4P0D8 188 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 FADS1O60427 444 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 CYB5AP00167 134 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 NAT2P11245 290 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 PRPS1P60891 318 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 DCDP81605 110 aaKnown RBP9.89□□□□□ -0.83
LINC00661-204ENST00000549354 DHRS2Q13268 280 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 IL11RAQ14626 422 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 LCN10Q6JVE6 187 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ANKRD37Q7Z713 158 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 PAQR8Q8TEZ7 354 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SCRG1O75711 98 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 IL5P05113 134 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 CSF1P09603 554 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ALOX5APP20292 161 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 CD34P28906 385 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 CAPZA2P47755 286 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 GGTLC2Q14390 218 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 TRIM61Q5EBN2 209 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 WBP2NLQ6ICG8 309 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 RAB12Q6IQ22 244 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ANKRD16Q6P6B7 361 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 OR6N1Q8NGY5 312 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 LDAHQ9H6V9 325 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 COPS7AQ9UBW8 275 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 MRPS18BQ9Y676 258 aaKnown RBP9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SPTA1P02549 2419 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 IGKV1D-43A0A0B4J1Z2 117 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 TMEM269A0A1B0GVZ9 245 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 OR2AT4A6NND4 320 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ALG1L2C9J202 215 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SULT1B1O43704 296 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SDHAP31040 664 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 DLSTP36957 453 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SNU13P55769 128 aaKnown RBP9.89□□□□□ -0.83
LINC00661-204ENST00000549354 GUCA2BQ16661 112 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 LY6G6FQ5SQ64 297 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 TFAP2EQ6VUC0 442 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SLC26A10Q8NG04 563 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 OR1S2Q8NGQ3 325 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 OR2I1PQ8NGU4 316 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 LRFN5Q96NI6 719 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 SMIM3Q9BZL3 60 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 HPF1Q9NWY4 346 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 TMED7Q9Y3B3 224 aa9.89□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF736B4DX44 427 aaPredicted RBP9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ARPC3O15145 178 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ATG12O94817 140 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 HPP00738 406 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 KNG1P01042 644 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 PNMTP11086 282 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF823P16415 610 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 SCRN3Q0VDG4 424 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF684Q5T5D7 378 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 TMPPEQ6ZT21 453 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 SLC29A4Q7RTT9 530 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 NECAB3Q96P71 396 aaPredicted RBP9.88□□□□□ -0.83
LINC00661-204ENST00000549354 EMC3Q9P0I2 261 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 DMXL2Q8TDJ6 3036 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 A0A0B4J2A0 478 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 EIF4E2O60573 245 aaKnown RBP9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ABHD16AO95870 558 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ABOP16442 354 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 KLK2P20151 261 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 MPGP29372 298 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 SLC6A9P48067 706 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 SRSF3P84103 164 aaKnown RBP9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ATPAF1Q5TC12 328 aaPredicted RBP9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ASPHD2Q6ICH7 369 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 FAM180AQ6UWF9 173 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 PPP1R3BQ86XI6 285 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 CLEC1AQ8NC01 280 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 RNF138Q8WVD3 245 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 SEH1LQ96EE3 360 aa9.88□□□□□ -0.83
LINC00661-204ENST00000549354 ST6GALNAC5Q9BVH7 336 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms