RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CDK5Q00535 292 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 SNAI3Q3KNW1 292 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 FAHD1Q6P587 224 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 ASRGL1Q7L266 308 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 DPY19L4Q7Z388 723 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 PRIMA1Q86XR5 153 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 OR2AE1Q8NHA4 323 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 PYDC1Q8WXC3 89 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 CGGBP1Q9UFW8 167 aaPredicted RBP13.38□□□□□ -0.27
DDX54-205ENST00000548786 KCNS2Q9ULS6 477 aa13.38□□□□□ -0.27
DDX54-205ENST00000548786 H0YL77 283 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 LMX1BO60663 402 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 GLCEO94923 617 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 HMGN1P05114 100 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 TUBG1P23258 451 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 TNFSF4P23510 183 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 IGFBP5P24593 272 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 CRISP1P54107 249 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 MALLQ13021 153 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 GK2Q14410 553 aaPredicted RBP13.37□□□□□ -0.27
DDX54-205ENST00000548786 SNAPC1Q16533 368 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
DDX54-205ENST00000548786 MRPL21Q7Z2W9 205 aaKnown RBP13.37□□□□□ -0.27
DDX54-205ENST00000548786 ST7LQ8TDW4 575 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 ITLN1Q8WWA0 313 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 ZNF582Q96NG8 517 aaPredicted RBP13.37□□□□□ -0.27
DDX54-205ENST00000548786 OR2V2Q96R30 315 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 DIRC2Q96SL1 478 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 AMELYQ99218 206 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 TUBG2Q9NRH3 451 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
DDX54-205ENST00000548786 DNAJC27Q9NZQ0 273 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 WIPI2Q9Y4P8 454 aa13.37□□□□□ -0.27
DDX54-205ENST00000548786 SAC3D1A6NKF1 404 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 FAM157AC9JC47 383 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 ZNF878C9JN71 531 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 J3QW42 95 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 HLA-DPB1P04440 258 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 ADH4P08319 380 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 EPHA2P29317 976 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 BLVRAP53004 296 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 KPNB1Q14974 876 aaKnown RBP13.36□□□□□ -0.27
DDX54-205ENST00000548786 CHRFAM7AQ494W8 412 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 HIPK1Q86Z02 1210 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 LINC01356Q8N9X3 169 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 HPS1Q92902 700 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 TIMD4Q96H15 378 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 ABHD6Q9BV23 337 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 TEX12Q9BXU0 123 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 BEX2Q9BXY8 128 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 SLC25A19Q9HC21 320 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 BRD7Q9NPI1 651 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
DDX54-205ENST00000548786 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.278e-8■■■■■ 29.6
DDX54-205ENST00000548786 KIAA1324LA8MWY0 1029 aaPredicted RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 F5H5P2 479 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 TBX1O43435 398 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 ANXA2P07355 339 aaKnown RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 CD55P08174 381 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 MRPL3P09001 348 aaKnown RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 SELEP16581 610 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 HSD11B1P28845 292 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 CX3CR1P49238 355 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 CDH15P55291 814 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 ZNF92Q03936 586 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 APOFQ13790 326 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 PCK2Q16822 640 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 GFOD2Q3B7J2 385 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 TEX30Q5JUR7 227 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 BCDIN3DQ7Z5W3 292 aaKnown RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 THEM6Q8WUY1 208 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 SPRYD4Q8WW59 207 aaPredicted RBP13.35□□□□□ -0.27
DDX54-205ENST00000548786 DNAJC9Q8WXX5 260 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 KCNJ15Q99712 375 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 SHARPINQ9H0F6 387 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 OAZ3Q9UMX2 235 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 KLHDC2Q9Y2U9 406 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
DDX54-205ENST00000548786 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 IQCF6A8MYZ5 107 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 MLNRO43193 412 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 PRKYO43930 277 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 FCGR1AP12314 374 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 OTX1P32242 354 aaPredicted RBP13.34□□□□□ -0.27
DDX54-205ENST00000548786 HCCSP53701 268 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 FAM120AOSQ5T036 256 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 DRAM2Q6UX65 266 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms