RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR9Q2Q8NGE9 314 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 OR4C15Q8NGM1 316 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 POP5Q969H6 163 aaKnown RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 SLCO4A1Q96BD0 722 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 ATF6BQ99941 703 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 BTBD10Q9BSF8 475 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 RBM4Q9BWF3 364 aaKnown RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 NSRP1Q9H0G5 558 aaKnown RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 TVP23AA6NH52 213 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 BHLHE40O14503 412 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 LCATP04180 440 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 ATP6V1B2P21281 511 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 UBA52P62987 128 aaKnown RBP11.17□□□□□ -0.62
CPSF6-204ENST00000547486 GNGT1P63211 74 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
CPSF6-204ENST00000547486 PPP1R8Q12972 351 aaKnown RBP11.17□□□□□ -0.62
CPSF6-204ENST00000547486 ECH1Q13011 328 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 SLC36A3Q495N2 470 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 LYPD4Q6UWN0 246 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 CYP2R1Q6VVX0 501 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 OR51L1Q8NGJ5 315 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 OR8D4Q8NGM9 314 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 OR2AJ1Q8NGZ0 328 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 TMEM246Q9BRR3 403 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 HCAR1Q9BXC0 346 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 NUP50Q9UKX7 468 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 ARL2BPQ9Y2Y0 163 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 LYVE1Q9Y5Y7 322 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 WNK2Q9Y3S1 2297 aa11.17□□□□□ -0.62
CPSF6-204ENST00000547486 IFNL4K9M1U5 179 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 TNFRSF11BO00300 401 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 KRT36O76013 467 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 MPPED2Q15777 294 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF181Q2M3W8 571 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF404Q494X3 552 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 ARMCX4Q5H9R4 360 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 C16orf89Q6UX73 402 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 LYPD2Q6UXB3 125 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 KLBQ86Z14 1044 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 MUC20Q8N307 709 aaPredicted RBP11.16□□□□□ -0.62
CPSF6-204ENST00000547486 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 C19orf18Q8NEA5 215 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 DACT3Q96B18 629 aaPredicted RBP11.16□□□□□ -0.62
CPSF6-204ENST00000547486 C1orf147Q96MC9 270 aaPredicted RBP11.16□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
CPSF6-204ENST00000547486 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
CPSF6-204ENST00000547486 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 NTN4Q9HB63 628 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 IL20Q9NYY1 176 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 CDH10Q9Y6N8 788 aa11.16□□□□□ -0.62
CPSF6-204ENST00000547486 IGHV3OR16-10A0A075B7F0 116 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 TCRBV5S2A0A599 114 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 RPS2P15880 293 aaKnown RBP11.15□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF823P16415 610 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 GATA4P43694 442 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 RAD23AP54725 363 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 TPTEP56180 551 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 MXRA7P84157 204 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF92Q03936 586 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 SPATS1Q496A3 300 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 PRAMEF6Q5VXH4 476 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 PGAP1Q75T13 922 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 DOK3Q7L591 496 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 SLC37A3Q8NCC5 494 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 PROKR2Q8NFJ6 384 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 OR4Q3Q8NH05 313 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
CPSF6-204ENST00000547486 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 ACTR3BQ9P1U1 418 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 MIOXQ9UGB7 285 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 LRCH1Q9Y2L9 728 aa11.15□□□□□ -0.62
CPSF6-204ENST00000547486 LRRC30A6NM36 301 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 B2RBV5 119 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 M0R135 149 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 FAM20BO75063 409 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 CCNB2O95067 398 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 FSTL3O95633 263 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 EGR1P18146 543 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 CA6P23280 308 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 OTX1P32242 354 aaPredicted RBP11.14□□□□□ -0.63
CPSF6-204ENST00000547486 CD200P41217 278 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 MAGEA2P43356 314 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 MS4A2Q01362 244 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 MALLQ13021 153 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 AWAT1Q58HT5 328 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 RASSF6Q6ZTQ3 369 aa11.14□□□□□ -0.63
CPSF6-204ENST00000547486 LNX2Q8N448 690 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms