RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF593O00488 134 aaPredicted RBP13.47□□□□□ -0.25
DDX54-204ENST00000546898 GSTT1P30711 240 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 SLC6A9P48067 706 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 OR2T2Q6IF00 324 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 ERI1Q8IV48 349 aaKnown RBP13.47□□□□□ -0.25
DDX54-204ENST00000546898 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 OR13G1Q8NGZ3 307 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 ST7LQ8TDW4 575 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 CCL17Q92583 94 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 OTULINQ96BN8 352 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 ZNF582Q96NG8 517 aaPredicted RBP13.47□□□□□ -0.25
DDX54-204ENST00000546898 KCNJ15Q99712 375 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 SHARPINQ9H0F6 387 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 NARFLQ9H6Q4 476 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 WIPI2Q9Y4P8 454 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 CACNG2Q9Y698 323 aa13.47□□□□□ -0.25
DDX54-204ENST00000546898 B4DSR2 109 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 HNF1AP20823 631 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 PCMT1P22061 227 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 SLC15A1P46059 708 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 DAPP51397 102 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 CRISP1P54107 249 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 ESRRGP62508 458 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
DDX54-204ENST00000546898 EIF2B1Q14232 305 aaKnown RBP13.46□□□□□ -0.25
DDX54-204ENST00000546898 GK2Q14410 553 aaPredicted RBP13.46□□□□□ -0.25
DDX54-204ENST00000546898 TAF13Q15543 124 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 SLC35D3Q5M8T2 416 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 PLBD1Q6P4A8 553 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 CCDC121Q6ZUS5 278 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 RHOUQ7L0Q8 258 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 ASRGL1Q7L266 308 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 PEG10Q86TG7 708 aaKnown RBP13.46□□□□□ -0.25
DDX54-204ENST00000546898 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 OR5AS1Q8N127 324 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 RAB39BQ96DA2 213 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 SLC30A2Q9BRI3 323 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 BEX2Q9BXY8 128 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 GABARAPL1Q9H0R8 117 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 OR51V1Q9H2C8 321 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
DDX54-204ENST00000546898 A0A1B0GWJ7 208 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 G3V2T6 193 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 WNT9BO14905 357 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 APOC1P02654 83 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 DVL1P1P54792 670 aaPredicted RBP13.45□□□□□ -0.26
DDX54-204ENST00000546898 LMO4P61968 165 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 MVKQ03426 396 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 AVPI1Q5T686 147 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 PGAP1Q75T13 922 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
DDX54-204ENST00000546898 NAA40Q86UY6 237 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 ZDHHC13Q8IUH4 622 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 CPOQ8IVL8 374 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 TIGD4Q8IY51 512 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 RNF133Q8WVZ7 376 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 ITLN1Q8WWA0 313 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 OR2V2Q96R30 315 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 SP140LQ9H930 580 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 KRT84Q9NSB2 600 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 CENPMQ9NSP4 180 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 TMEM106BQ9NUM4 274 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 ENOPH1Q9UHY7 261 aa13.45□□□□□ -0.26
DDX54-204ENST00000546898 IFNA2P01563 188 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 HSD11B1P28845 292 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
DDX54-204ENST00000546898 PRKXP51817 358 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 SNAPC1Q16533 368 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 SNAI3Q3KNW1 292 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 KLHL12Q53G59 568 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 SPRNQ5BIV9 151 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 FAM120AOSQ5T036 256 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 TMEM236Q5W0B7 351 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 CXXC5Q7LFL8 322 aaKnown RBP13.44□□□□□ -0.26
DDX54-204ENST00000546898 GLCCI1Q86VQ1 547 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 BHLHE23Q8NDY6 225 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 OR10AD1Q8NGE0 317 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 OR51F2Q8NH61 342 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 ZMYND19Q96E35 227 aaPredicted RBP13.44□□□□□ -0.26
DDX54-204ENST00000546898 ABHD6Q9BV23 337 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 TREM2Q9NZC2 230 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 PPP1R3CQ9UQK1 317 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
DDX54-204ENST00000546898 NPTNQ9Y639 398 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 ATRQ13535 2644 aa13.44□□□□□ -0.26
DDX54-204ENST00000546898 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 MLNRO43193 412 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 XRCC2O43543 280 aa13.43□□□□□ -0.26
DDX54-204ENST00000546898 IGHV2-5P01817 119 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms