RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.54■□□□□ 0.4
HMGA2-211ENST00000545998 LRRC75A-AS1Q8N1F1 130 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF283Q8N7M2 679 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 OR5L1Q8NGL2 311 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 OR2T27Q8NH04 317 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 CNIH3Q8TBE1 160 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 OR8B4Q96RC9 309 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 PTTG3PQ9NZH4 202 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 LRP12Q9Y561 859 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 HSPE1-MOB4S4R3N1 261 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 CHD3Q12873 2000 aaKnown RBP17.54■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF670-ZNF695F2Z2N8 137 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 J3QRE1 110 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 APOC1P02654 83 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 DBTP11182 482 aaKnown RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 PPOXP50336 477 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 SMN1Q16637 294 aaKnown RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 SNAI3Q3KNW1 292 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 C6orf52Q5T4I8 152 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF322Q6U7Q0 402 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 KRT77Q7Z794 578 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF679Q8IYX0 411 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 OR10H4Q8NGA5 316 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 LGALS12Q96DT0 336 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 PERPQ96FX8 193 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 TBX5Q99593 518 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 TTTY10Q9BZA0 68 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 CXXC4Q9H2H0 198 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 TAAR3PQ9P1P4 343 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 EXOGQ9Y2C4 368 aaKnown RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 A0A1W2PPW3 197 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 A0A1W2PQL4 384 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 PSMD9O00233 223 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 SLC2A1P11166 492 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 ALDH3B1P43353 468 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 EGR3Q06889 387 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 PSG7Q13046 419 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 HLXQ14774 488 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 FBXW12Q6X9E4 464 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 SSX6Q7RTT6 188 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 PRSS45Q7RTY3 260 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 C8orf59Q8N0T1 100 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 TRMT61AQ96FX7 289 aaKnown RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 MROQ9BYG7 248 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 NIPAL2Q9H841 368 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 AMBNQ9NP70 447 aa17.53■□□□□ 0.4
HMGA2-211ENST00000545998 RPL36Q9Y3U8 105 aaKnown RBP17.53■□□□□ 0.4
HMGA2-211ENST00000545998 C5orf63A6NC05 138 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 M0R233 179 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF254O75437 659 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 RAC2P15153 192 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 ART1P52961 327 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF121P58317 390 aaPredicted RBP17.52■□□□□ 0.39
HMGA2-211ENST00000545998 FBLIM1Q8WUP2 373 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 HAVCR1Q96D42 359 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 CMBLQ96DG6 245 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 DYNLRB1Q9NP97 96 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 MRPS18AQ9NVS2 196 aaKnown RBP17.52■□□□□ 0.39
HMGA2-211ENST00000545998 ITGB1BP2Q9UKP3 347 aa17.52■□□□□ 0.39
HMGA2-211ENST00000545998 NDUFS7O75251 213 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 ANXA2P07355 339 aaKnown RBP17.51■□□□□ 0.39
HMGA2-211ENST00000545998 ADRA2AP08913 450 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 KITLGP21583 273 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 ATP5J2P56134 94 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 PSMA6P60900 246 aaKnown RBP17.51■□□□□ 0.39
HMGA2-211ENST00000545998 MOGQ16653 247 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 NKPD1Q17RQ9 610 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 IZUMO2Q6UXV1 221 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 ZCCHC24Q8N2G6 241 aaKnown RBP17.51■□□□□ 0.39
HMGA2-211ENST00000545998 SP140LQ9H930 580 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 IKZF2Q9UKS7 526 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
HMGA2-211ENST00000545998 MAGEB4O15481 346 aaPredicted RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 IGHV4-39P01824 125 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 DCTDP32321 178 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 VHLP40337 213 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 MMP15P51511 669 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 RIDAP52758 137 aaKnown RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF85Q03923 595 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 RAB40BQ12829 278 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 MALLQ13021 153 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 CDK5R2Q13319 367 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 GK2Q14410 553 aaPredicted RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 ALKBH6Q3KRA9 238 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF684Q5T5D7 378 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 VRK1Q99986 396 aaPredicted RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 MRM2Q9UI43 246 aaKnown RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 PURGQ9UJV8 347 aaKnown RBP17.5■□□□□ 0.39
HMGA2-211ENST00000545998 N6AMT1Q9Y5N5 214 aa17.5■□□□□ 0.39
HMGA2-211ENST00000545998 NAT2P11245 290 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 ACTC1P68032 377 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 ACTA1P68133 377 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 ZNF92Q03936 586 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 TESK1Q15569 626 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 GLYATL3Q5SZD4 288 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 LAIR2Q6ISS4 152 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 FAM57BQ71RH2 274 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 THAP5Q7Z6K1 395 aa17.49■□□□□ 0.39
HMGA2-211ENST00000545998 SORCS2Q96PQ0 1159 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms