RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-225	ENST00000545934	FCN3	O75636	299 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	IGHV4-59	P01825	116 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	PRSS12	P56730	875 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	FXYD6P3	P58550	94 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	COX10	Q12887	443 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	MPPED2	Q15777	294 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	PRAMEF6	Q5VXH4	476 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	PGM2L1	Q6PCE3	622 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	TSEN54	Q7Z6J9	526 aa	Known RBP	13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	ADCK1	Q86TW2	530 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	OR11L1	Q8NGX0	322 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	LZIC	Q8WZA0	190 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	UBE2F	Q969M7	185 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	TECTB	Q96PL2	329 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	HCAR1	Q9BXC0	346 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	TRIM15	Q9C019	465 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	ANKRD19P	Q9H560	264 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	SMURF1	Q9HCE7	757 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	SIGLEC7	Q9Y286	467 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	ZNF281	Q9Y2X9	895 aa		13.79	□□□□□ -0.2
CPSF7-225	ENST00000545934	IGLV1-36	A0A0B4J1U3	117 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	ELOVL7	A1L3X0	281 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	DCTN6	O00399	190 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	NDUFB2	O95178	105 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	PPP1R3D	O95685	299 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	TXNDC12	O95881	172 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	ACSM4	P0C7M7	580 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	CDKN2A	P42771	156 aa	Known RBP	13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	MEP1B	Q16820	701 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	SLC7A13	Q8TCU3	470 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	RERGL	Q9H628	205 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	C16orf95	Q9H693	158 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	INTS9	Q9NV88	658 aa	Known RBP	13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	KIF17	Q9P2E2	1029 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	ERVK-18	Q9QC07	812 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	RNF7	Q9UBF6	113 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	TMEM5	Q9Y2B1	443 aa		13.78	□□□□□ -0.2
CPSF7-225	ENST00000545934	DNAH3	Q8TD57	4116 aa		13.77	□□□□□ -0.2
CPSF7-225	ENST00000545934		A0A0G2JND7	137 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934		A0A0U1RQK1	487 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	LGALS8	O00214	317 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	KLF10	Q13118	480 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	KCNJ8	Q15842	424 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	CORO6	Q6QEF8	472 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934		Q6ZSV7	163 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	C1QL4	Q86Z23	238 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	PNLDC1	Q8NA58	520 aa	Known RBP	13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	FAM46A	Q96IP4	442 aa	Known RBP	13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	TSSK2	Q96PF2	358 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	NDEL1	Q9GZM8	345 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	UFSP2	Q9NUQ7	469 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	GMPR2	Q9P2T1	348 aa	Known RBP	13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	RPS6KA6	Q9UK32	745 aa		13.77	□□□□□ -0.21
CPSF7-225	ENST00000545934	SOCS2	O14508	198 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	C11orf91	Q3C1V1	193 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	IFI44L	Q53G44	452 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	FBLN7	Q53RD9	439 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	METTL11B	Q5VVY1	283 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	SLC18B1	Q6NT16	456 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	CFAP77	Q6ZQR2	320 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	CBLL1	Q75N03	491 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	NAA40	Q86UY6	237 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	PIP4P2	Q8N4L2	257 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	PLPP7	Q8NBV4	271 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	SLC26A10	Q8NG04	563 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	LHX4	Q969G2	390 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	TMEM120A	Q9BXJ8	343 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	TCF7L1	Q9HCS4	588 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	PNRC2	Q9NPJ4	139 aa	Known RBP	13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	CMTM6	Q9NX76	183 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	B9D1	Q9UPM9	204 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	POLR1D	Q9Y2S0	133 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	IER3IP1	Q9Y5U9	82 aa		13.76	□□□□□ -0.21
CPSF7-225	ENST00000545934	C5orf63	A6NC05	138 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	ADAM20	O43506	726 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	NDUFA2	O43678	99 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	CRABP1	P29762	137 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	OMP	P47874	163 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	DPY19L2P2	Q6ZN68	376 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	GDPGP1	Q6ZNW5	385 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	OR6V1	Q8N148	313 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	SLCO4A1	Q96BD0	722 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	SLC22A4	Q9H015	551 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	RASSF4	Q9H2L5	321 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	FN3KRP	Q9HA64	309 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	TRIM36	Q9NQ86	728 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	SAR1A	Q9NR31	198 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	MRGBP	Q9NV56	204 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	GID8	Q9NWU2	228 aa		13.75	□□□□□ -0.21
CPSF7-225	ENST00000545934	OOEP	A6NGQ2	149 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	C3orf80	F5H4A9	247 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	GMDS	O60547	372 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	TSPAN9	O75954	239 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	CA6	P23280	308 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	GGT2	P36268	569 aa		13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	MDH1	P40925	334 aa	Known RBP	13.74	□□□□□ -0.21
CPSF7-225	ENST00000545934	ECH1	Q13011	328 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms