RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 OR8G1Q15617 311 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ZIC1Q15915 447 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CADM4Q8NFZ8 388 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 LRRC61Q9BV99 259 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 LIN7CQ9NUP9 197 aaKnown RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 BCL2L11O43521 198 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 TAGLN2P37802 199 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 SLC16A12Q6ZSM3 486 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 AUNIPQ9H7T9 357 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ANKRD12Q6UB98 2062 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 CBR3O75828 277 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 SLC25A35Q3KQZ1 300 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 MMP25Q9NPA2 562 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ADAM10O14672 748 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ATF1P18846 271 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 DSCR4P56555 118 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 DBPQ10586 325 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 RBMXL3Q8N7X1 1067 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 OR4C16Q8NGL9 310 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 TXN2Q99757 166 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF391Q9UJN7 358 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 SLC22A13Q9Y226 551 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 RAB1AP62820 205 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 FLI1Q01543 452 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 PCNPQ8WW12 178 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 C11orf40Q8WZ69 217 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 ARV1Q9H2C2 271 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 DECR2Q9NUI1 292 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 EXO1Q9UQ84 846 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 DHHO43323 396 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 FABP1P07148 127 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 CORO6Q6QEF8 472 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 YRDCQ86U90 279 aaKnown RBP11.32□□□□□ -0.6
COL4A6-209ENST00000545689 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
COL4A6-209ENST00000545689 TERTO14746 1132 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF354AO60765 605 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 NME1P15531 152 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 FOXF1Q12946 379 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 DEGS2Q6QHC5 323 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 LSRQ86X29 649 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 C1orf87Q8N0U7 546 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 CORO2AQ92828 525 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GOLGA4Q13439 2230 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 QSER1Q2KHR3 1735 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GNB3P16520 340 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 HRH1P35367 487 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF141Q15928 474 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 PRICKLE4Q2TBC4 344 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 CPEB3Q8NE35 698 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF680Q8NEM1 530 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 FGF14Q92915 247 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF705GA8MUZ8 300 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 DTYMKP23919 212 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 OR8B8Q15620 311 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 TEX19Q8NA77 164 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 OR2J2O76002 312 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 MBP02144 154 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GUSBP08236 651 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 SPNP16150 400 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GABRG2P18507 467 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 FCGR2CP31995 323 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 FUT6P51993 359 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GFERP55789 205 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 ZDHHC23Q8IYP9 409 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GALNT16Q8N428 558 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 GPBAR1Q8TDU6 330 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A6-209ENST00000545689 EGLN1Q9GZT9 426 aa11.31□□□□□ -0.6
COL4A6-209ENST00000545689 HRO43593 1189 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 RAB4AP20338 218 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 FUT7Q11130 342 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 TAF9Q16594 264 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 LTC4SQ16873 150 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
COL4A6-209ENST00000545689 BAP18Q8IXM2 172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms