RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LPAR3Q9UBY5 353 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TMEM184BQ9Y519 407 aaPredicted RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 PCP4L1A6NKN8 68 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 TMEM14DPA8MWL7 114 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 SEMA4FO95754 770 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 IFNA4P05014 189 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PET100P0DJ07 73 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 VSIG8P0DPA2 414 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 CTSEP14091 401 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 AKR1C4P17516 323 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PAX6P26367 422 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 NR0B1P51843 470 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 PNLIPRP2P54317 469 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 ZP2Q05996 745 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 EBPQ15125 230 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 FAM189A2Q15884 450 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 PRSS54Q6PEW0 395 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 TMEM88Q6PEY1 159 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 GVQW1Q8N7I0 195 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 ZNF248Q8NDW4 579 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 MAP3K3Q99759 626 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 RPP25Q9BUL9 199 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 RNF126Q9BV68 326 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 FN3KRPQ9HA64 309 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 MYEF2Q9P2K5 600 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 DNAJB11Q9UBS4 358 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 FTCDNL1E5RQL4 147 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 P2RY10O00398 339 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 SSX5O60225 188 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 FAM157CP0CG43 387 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 ABOP16442 354 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 ABCD3P28288 659 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 BLKP51451 505 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PLCXD2Q0VAA5 305 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 FZD2Q14332 565 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 HYAL4Q2M3T9 481 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PLEKHN1Q494U1 663 aaPredicted RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 HLA-DQA1Q5Y7H0 255 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 EIF5AL1Q6IS14 154 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 MARCH3Q86UD3 253 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 CBLN2Q8IUK8 224 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PRR22Q8IZ63 422 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 METTL27Q8N6F8 245 aaPredicted RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 BOLLQ8N9W6 283 aaKnown RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 ZSCAN4Q8NAM6 433 aaPredicted RBP7.8□□□□□ -1.16
TDP1-204ENST00000545686 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 OR4K15Q8NH41 348 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 TERB2Q8NHR7 220 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 CMBLQ96DG6 245 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 SMIM8Q96KF7 97 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 GAL3ST4Q96RP7 486 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 C12orf57Q99622 126 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 TLNRD1Q9H1K6 362 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 MOB1AQ9H8S9 216 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 UQCC1Q9NVA1 299 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 FAM206AQ9NX38 181 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 COA4Q9NYJ1 87 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 WIF1Q9Y5W5 379 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
TDP1-204ENST00000545686 LOC100509620A0A075B734 347 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 LILRA5A6NI73 299 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 OR6C76A6NM76 312 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 B4DGG1 531 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 LMX1BO60663 402 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 MPZL1O95297 269 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 SFT2D2O95562 160 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TTRP02766 147 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 CA3P07451 260 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 DRD1P21728 446 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 FASLGP48023 281 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 CCR5P51681 352 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 MST1LQ2TV78 715 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 AVPI1Q5T686 147 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 NSUN5P2Q63ZY6 315 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 OR52N4Q8NGI2 321 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 OR5D14Q8NGL3 314 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 GPR119Q8TDV5 335 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 ADAMTS17Q8TE56 1095 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 GLYATL2Q8WU03 294 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TMED6Q8WW62 240 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 FGGYQ96C11 551 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 RRNAD1Q96FB5 475 aaKnown RBP7.79□□□□□ -1.16
TDP1-204ENST00000545686 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 SELENOIQ9C0D9 397 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 PISDQ9UG56 409 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 GPR132Q9UNW8 380 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 C13orf42A0A1B0GVH6 325 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 NPIPA5E9PKD4 350 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 TAAR5O14804 337 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 SYT7O43581 403 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 IGHV4-34P06331 123 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 FOLR2P14207 255 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 GNB3P16520 340 aa7.79□□□□□ -1.16
TDP1-204ENST00000545686 FPR2P25090 351 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms