RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 EXO5Q9H790 373 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 PLEKHA1Q9HB21 404 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 NOX4Q9NPH5 578 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 B3GAT2Q9NPZ5 323 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 PAQR5Q9NXK6 330 aaPredicted RBP6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 GLTPQ9NZD2 209 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 NLKQ9UBE8 527 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 MALT1Q9UDY8 824 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 PRELID1Q9Y255 219 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF835Q9Y2P0 537 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 ARHGAP21Q5T5U3 1957 aa6.16□□□□□ -1.42
HMGCS2-204ENST00000544913 CHD6Q8TD26 2715 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MEGF11A6BM72 1044 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 GABARAPH6UMI1 98 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 GPR171O14626 319 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MAGEB4O15481 346 aaPredicted RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 SS18L1O75177 396 aaPredicted RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 OR10A3P58181 314 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MAB21L1Q13394 359 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 LY6DQ14210 128 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 GPR176Q14439 515 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 KCNMB1Q16558 191 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC25A35Q3KQZ1 300 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 PLA1AQ53H76 456 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 KRTCAP3Q53RY4 240 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 TEX30Q5JUR7 227 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 PDSS1Q5T2R2 415 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM27D1Q5T7N8 215 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 NSUN5P2Q63ZY6 315 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM180AQ6UWF9 173 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 STAC2Q6ZMT1 411 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 HDDC2Q7Z4H3 204 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF679Q8IYX0 411 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 NAXEQ8NCW5 288 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 OR6N2Q8NGY6 317 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 OR2G2Q8NGZ5 317 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 GRPEL2Q8TAA5 225 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 UBASH3BQ8TF42 649 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 SMIM4Q8WVI0 70 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 AKAP1Q92667 903 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 OR8B4Q96RC9 309 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 ABHD1Q96SE0 405 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 PDCD1LG2Q9BQ51 273 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 SLA2Q9H6Q3 261 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 KLHL9Q9P2J3 617 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MRM2Q9UI43 246 aaKnown RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 POU2F3Q9UKI9 436 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MCTS1Q9ULC4 181 aaKnown RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 COA3Q9Y2R0 106 aaPredicted RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 AK6Q9Y3D8 172 aaKnown RBP6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 PCNX1Q96RV3 2341 aa6.15□□□□□ -1.42
HMGCS2-204ENST00000544913 MBD3L4A6NDZ8 208 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 MBD3L3A6NE82 208 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 MBD3L5A6NJ08 208 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 OR4C45A6NMZ5 311 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ZNF593O00488 134 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 DVL2O14641 736 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 EEF1E1O43324 174 aaKnown RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 PRAF2O60831 178 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 TNFSF13O75888 250 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 SYNGR4O95473 234 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 C1QBP02746 253 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 HRGP04196 525 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CD2P06729 351 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 QDPRP09417 244 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ARSBP15848 533 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ANOS1P23352 680 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CDAP32320 146 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CSNK1A1P48729 337 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ART1P52961 327 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 KLRB1Q12918 225 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 FOXF2Q12947 444 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 SNTB2Q13425 540 aaKnown RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CDK10Q15131 360 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 RNPS1Q15287 305 aaKnown RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 C4orf46Q504U0 113 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 THEM4Q5T1C6 240 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 RIPPLY2Q5TAB7 128 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 TSPO2Q5TGU0 170 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 KRT74Q7RTS7 529 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 AAED1Q7RTV5 226 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 DPY19L4Q7Z388 723 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 GCNT2Q8N0V5 402 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ZNF676Q8N7Q3 588 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 OR10S1Q8NGN2 331 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 MBD3L2Q8NHZ7 208 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 FAM57AQ8TBR7 257 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ST7LQ8TDW4 575 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 THEM6Q8WUY1 208 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 FCAMRQ8WWV6 532 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 C11orf40Q8WZ69 217 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 YIPF5Q969M3 257 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 MAP6Q96JE9 813 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 HYLS1Q96M11 299 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CNTNAP3BQ96NU0 1288 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 ALKBH3Q96Q83 286 aaPredicted RBP6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 GON7Q9BXV9 100 aa6.15□□□□□ -1.43
HMGCS2-204ENST00000544913 CNTNAP3Q9BZ76 1288 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms