RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 FMODQ06828 376 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 MYBPHQ13203 477 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 AWAT2Q6E213 333 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 MDGA2Q7Z553 956 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 STPG2Q8N412 459 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 GALNT11Q8NCW6 608 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 SLC6A7Q99884 636 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 IER2Q9BTL4 223 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 CST11Q9H112 138 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 SLC22A11Q9NSA0 550 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 VDAC3Q9Y277 283 aa11.6□□□□□ -0.55
CPSF7-223ENST00000544669 TMEM235A6NFC5 223 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 MEN1O00255 615 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 YKT6O15498 198 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 BCL2L11O43521 198 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 EIF1BO60739 113 aaKnown RBP11.59□□□□□ -0.55
CPSF7-223ENST00000544669 PGA4P0DJD7 388 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 PGA3P0DJD8 388 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ZNF250P15622 560 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ENPP1P22413 925 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ECI1P42126 302 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 PRKXP51817 358 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 VAX1Q5SQQ9 334 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 DCAF12L2Q5VW00 463 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 NSUN5P2Q63ZY6 315 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-223ENST00000544669 SLC25A47Q6Q0C1 308 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ALKAL2Q6UX46 152 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 NAA40Q86UY6 237 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ANGPTL5Q86XS5 388 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ZNF101Q8IZC7 436 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 KDM8Q8N371 416 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 ACBD4Q8NC06 268 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 BVESQ8NE79 360 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 PXT1Q8NFP0 134 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 OR13C8Q8NGS7 320 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 INTS12Q96CB8 462 aaKnown RBP11.59□□□□□ -0.55
CPSF7-223ENST00000544669 WDR89Q96FK6 387 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-223ENST00000544669 CPNE2Q96FN4 548 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-223ENST00000544669 DEFB126Q9BYW3 111 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 MED29Q9NX70 200 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 KLK13Q9UKR3 277 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 RHBDD3Q9Y3P4 386 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
CPSF7-223ENST00000544669 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 C9orf170A2RU37 121 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 TEX46H3BTG2 121 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 VSIG8P0DPA2 414 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 LY6G6FQ5SQ64 297 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 UQCC3Q6UW78 93 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 ARSKQ6UWY0 536 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR4K17Q8NGC6 315 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR52N4Q8NGI2 321 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR1J2Q8NGS2 313 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 NAT6Q93015 286 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 CCDC120Q96HB5 630 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 WDR54Q9H977 334 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 ANAPC10Q9UM13 185 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 KCNMB2Q9Y691 235 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 THADAQ6YHU6 1953 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 CEACAM18A8MTB9 384 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 H3BML4 177 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 CA11O75493 328 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 HPP00738 406 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 ZNF28P17035 718 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 IGFBP4P22692 258 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 CASRP41180 1078 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 EIF5AP63241 154 aaKnown RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OC90Q02509 493 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 SMAD2Q15796 467 aaKnown RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 HIST3H3Q16695 136 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 C2orf68Q2NKX9 166 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 TMEM128Q5BJH2 165 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 PPP1R3BQ86XI6 285 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 PAQR4Q8N4S7 273 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR2M3Q8NG83 312 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 TERB2Q8NHR7 220 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 RAB3CQ96E17 227 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 SPACA9Q96E40 222 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 DNAJA3Q96EY1 480 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 OR6C1Q96RD1 312 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 NUDT22Q9BRQ3 303 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 NAA11Q9BSU3 229 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 CRB3Q9BUF7 120 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 NMES1Q9C002 83 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 SHARPINQ9H0F6 387 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 SEC61A2Q9H9S3 476 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 RASL12Q9NYN1 266 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 B3GAT1Q9P2W7 334 aa11.58□□□□□ -0.56
CPSF7-223ENST00000544669 MRPS28Q9Y2Q9 187 aaKnown RBP11.58□□□□□ -0.56
CPSF7-223ENST00000544669 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 IGHV3-20A0A0C4DH32 117 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 AQP7P3A6NL99 342 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 GP1BAP07359 652 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms