RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
CD9-210ENST00000543916 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 MAGEB4O15481 346 aaPredicted RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 WBP4O75554 376 aaKnown RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 LY6HO94772 140 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 GNAO1P09471 354 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 NAT2P11245 290 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 PRSS12P56730 875 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 ZNF121P58317 390 aaPredicted RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 CXCR4P61073 352 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 ROM1Q03395 351 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 Q5PR19 223 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 KCTD18Q6PI47 426 aaPredicted RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 FBXW12Q6X9E4 464 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 PRSS45Q7RTY3 260 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 CNIH3Q8TBE1 160 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 CMBLQ96DG6 245 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 MNTQ99583 582 aa12.9□□□□□ -0.34
CD9-210ENST00000543916 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
CD9-210ENST00000543916 CHD3Q12873 2000 aaKnown RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 A0A1W2PQL4 384 aaPredicted RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 H0YAE9 185 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 RRP9O43818 475 aaKnown RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 OR2T7P0C7T2 308 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 DBTP11182 482 aaKnown RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 KITLGP21583 273 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 MMP15P51511 669 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 GK2Q14410 553 aaPredicted RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 GLYATL3Q5SZD4 288 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 OR10H4Q8NGA5 316 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 OR2T27Q8NH04 317 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 OR2AE1Q8NHA4 323 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 HAVCR1Q96D42 359 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 Q96MT0 163 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 AMBNQ9NP70 447 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 PURGQ9UJV8 347 aaKnown RBP12.89□□□□□ -0.35
CD9-210ENST00000543916 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 N6AMT1Q9Y5N5 214 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 VPS13CQ709C8 3753 aa12.89□□□□□ -0.35
CD9-210ENST00000543916 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 ZSCAN5BA6NJL1 495 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 H0YJX3 145 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 J3QRE1 110 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 PHYHO14832 338 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 SSX4O60224 188 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 APOC1P02654 83 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 RAC2P15153 192 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 EFNA4P52798 201 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 PSMA6P60900 246 aaKnown RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 ISL1P61371 349 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 ZNF85Q03923 595 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 ZNF92Q03936 586 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 MALLQ13021 153 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 IL18R1Q13478 541 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 OR2T2Q6IF00 324 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 DEGS2Q6QHC5 323 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 USP51Q70EK9 711 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 FAM57BQ71RH2 274 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 ZNF679Q8IYX0 411 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 SETD9Q8NE22 299 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 WFDC11Q8NEX6 87 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 TFAP2CQ92754 450 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 LGALS12Q96DT0 336 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 MROQ9BYG7 248 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 MS4A5Q9H3V2 200 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 NIPAL2Q9H841 368 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 BARX1Q9HBU1 254 aaPredicted RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 ZNF319Q9P2F9 582 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 MRM2Q9UI43 246 aaKnown RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
CD9-210ENST00000543916 EXOGQ9Y2C4 368 aaKnown RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
CD9-210ENST00000543916 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 SNTNA6NMZ2 147 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 C17orf100A8MU93 164 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 TBX1O43435 398 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 ZNF254O75437 659 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
CD9-210ENST00000543916 ZNF81P51508 661 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
CD9-210ENST00000543916 EGR3Q06889 387 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 MOGQ16653 247 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 ZNF684Q5T5D7 378 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms