RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 MUC13Q9H3R2 512 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 EGLN3Q9H6Z9 239 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 TMEM100Q9NV29 134 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 LRCH1Q9Y2L9 728 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 F5H5K5 113 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 TRIM77I1YAP6 450 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 TNFRSF11BO00300 401 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 ATP6V1B2P21281 511 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 PMELP40967 661 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 CD200P41217 278 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 RAD23AP54725 363 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 SEC61A1P61619 476 aaKnown RBP10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 MAB21L1Q13394 359 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 LINC00346Q8IVM7 164 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 ZDHHC22Q8N966 263 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 OR10AD1Q8NGE0 317 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 OR9Q2Q8NGE9 314 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 OR8D4Q8NGM9 314 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 OR2AJ1Q8NGZ0 328 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 OR2T4Q8NH00 348 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF420Q8TAQ5 688 aaPredicted RBP10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 CDADC1Q9BWV3 514 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 HCAR1Q9BXC0 346 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 DGCR6LQ9BY27 220 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 PLA2G12AQ9BZM1 189 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 FN3KQ9H479 309 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 NTN4Q9HB63 628 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 CMYA5Q8N3K9 4069 aa10.99□□□□□ -0.65
SEMA4D-223ENST00000540475 B2RBV5 119 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF823P16415 610 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 FPR2P25090 351 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 SLC25A1P53007 311 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 TPTEP56180 551 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 TRIM25Q14258 630 aaKnown RBP10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 GK3PQ14409 553 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 MICAQ29983 383 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF404Q494X3 552 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 SLC35F1Q5T1Q4 408 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 CD300LDQ6UXZ3 194 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 SLC37A3Q8NCC5 494 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 OR52L1Q8NGH7 329 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 NSL1Q96IY1 281 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 SLC6A7Q99884 636 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 WDR76Q9H967 626 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 BAIAP2Q9UQB8 552 aa10.98□□□□□ -0.65
SEMA4D-223ENST00000540475 F5H5P2 479 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 M0R135 149 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CCNB2O95067 398 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CYB5R3P00387 301 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 HLA-DQA2P01906 255 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 LCATP04180 440 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 T-ENOLP0DO92 83 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 PSKH1P11801 424 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CFPP27918 469 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 PYCR1P32322 319 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CD80P33681 288 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 MS4A2Q01362 244 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 MALLQ13021 153 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 ESCO2Q56NI9 601 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CLEC12AQ5QGZ9 265 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 DRAM2Q6UX65 266 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 PGAP1Q75T13 922 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 DOK3Q7L591 496 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 C1orf87Q8N0U7 546 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 OR4Q3Q8NH05 313 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 SPTSSAQ969W0 71 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF799Q96GE5 643 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 CCT8L2Q96SF2 557 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 TMEM246Q9BRR3 403 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 SLC22A4Q9H015 551 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 MIOXQ9UGB7 285 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 NUP50Q9UKX7 468 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 AUP1Q9Y679 476 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 COMMD3-BMI1R4GMX3 469 aa10.97□□□□□ -0.65
SEMA4D-223ENST00000540475 LRRC30A6NM36 301 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 HAX1O00165 279 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 GMDSO60547 372 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 HLA-DPB1P04440 258 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 PSMB10P40306 273 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF92Q03936 586 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 SNAI3Q3KNW1 292 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 LINC01590Q5TEZ4 76 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 OR2T5Q6IEZ7 315 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF841Q6ZN19 808 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 C9orf139Q6ZV77 190 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 RHOUQ7L0Q8 258 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF771Q7L3S4 317 aaPredicted RBP10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 DHFR2Q86XF0 187 aa10.96□□□□□ -0.65
SEMA4D-223ENST00000540475 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms