RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SOX7Q9BT81 388 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 TEX12Q9BXU0 123 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CHODLQ9H9P2 273 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CYSLTR2Q9NS75 346 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 DECR2Q9NUI1 292 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CGGBP1Q9UFW8 167 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 KLHDC2Q9Y2U9 406 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 NSD1Q96L73 2696 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 ZNF878C9JN71 531 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 INAFM1C9JVW0 142 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 WNT9BO14905 357 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 TPD52L2O43399 206 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 TACSTD2P09758 323 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 SLC2A1P11166 492 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 HOXB4P17483 251 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 IL2RGP31785 369 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 NAA10P41227 235 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 CRYBB2P43320 205 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 SLC6A9P48067 706 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 HCCSP53701 268 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 GK2Q14410 553 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 FAM209AQ5JX71 171 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 SLC35D3Q5M8T2 416 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 RNF133Q8WVZ7 376 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 TEAD3Q99594 435 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 KCNJ15Q99712 375 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 SAP30LQ9HAJ7 183 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 ZDHHC8Q9ULC8 765 aa15.53■□□□□ 0.08
SNRPA1-203ENST00000540017 IGHV1-69-2A0A0G2JMI3 117 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 TLX2O43763 284 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 CD55P08174 381 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 RIPPLY3P57055 190 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 RPS7P62081 194 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 TAF13Q15543 124 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 DRAM2Q6UX65 266 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 SHFQ7M4L6 423 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 TCEANCQ8N8B7 351 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 BHLHE23Q8NDY6 225 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 OTOSQ8NHW6 89 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 GABARAPL3Q9BY60 117 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 TREM2Q9NZC2 230 aa15.52■□□□□ 0.08
SNRPA1-203ENST00000540017 IQCF6A8MYZ5 107 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 H0YL77 283 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 OPRL1P41146 370 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 GPR6P46095 362 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 TMEM33P57088 247 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 TNFAIP6P98066 277 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF92Q03936 586 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 ZMAT1Q5H9K5 638 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 GLYATL3Q5SZD4 288 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 AADACL4Q5VUY2 407 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 OR8G5Q8NG78 346 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 OR2Z1Q8NG97 314 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 OR2AE1Q8NHA4 323 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 TMEM163Q8TC26 289 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 THEM6Q8WUY1 208 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 ELMOD3Q96FG2 381 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 IL4I1Q96RQ9 567 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 DIRC2Q96SL1 478 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 RBM4BQ9BQ04 359 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 RIBC2Q9H4K1 309 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 S100A14Q9HCY8 104 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 N6AMT1Q9Y5N5 214 aa15.51■□□□□ 0.07
SNRPA1-203ENST00000540017 EI24O14681 340 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 PPIHO43447 177 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 ALPLP05186 524 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 MRPL3P09001 348 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 CX3CR1P49238 355 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 GRB2P62993 217 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 C6orf52Q5T4I8 152 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 PRSS45Q7RTY3 260 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF283Q8N7M2 679 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 MSI2Q96DH6 328 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF582Q96NG8 517 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 NARFLQ9H6Q4 476 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 YAE1D1Q9NRH1 226 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 DCAF16Q9NXF7 216 aa15.5■□□□□ 0.07
SNRPA1-203ENST00000540017 HIVEP2P31629 2446 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 C2CD3Q4AC94 2353 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 MLNRO43193 412 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 LYNP07948 512 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF16P17020 682 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 SLC15A1P46059 708 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 CHN2P52757 468 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 MALLQ13021 153 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 AVPI1Q5T686 147 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 CYB5R2Q6BCY4 276 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 PGAP1Q75T13 922 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 RHOUQ7L0Q8 258 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 MEPCEQ7L2J0 689 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 SLC16A9Q7RTY1 509 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF454Q8N9F8 522 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 OR10AD1Q8NGE0 317 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 CLDND2Q8NHS1 167 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 ITLN1Q8WWA0 313 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 CCL17Q92583 94 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 POM121Q96HA1 1249 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 SLC30A2Q9BRI3 323 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 REPIN1Q9BWE0 567 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms