RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF696Q9H7X3 374 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SRA1Q9HD15 236 aaKnown RBP10.45□□□□□ -0.74
VAMP1-206ENST00000538970 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
VAMP1-206ENST00000538970 TMEM100Q9NV29 134 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
VAMP1-206ENST00000538970 V9GYQ6 96 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
VAMP1-206ENST00000538970 KIR2DS1A0A191URI9 304 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 RENP00797 406 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 HIST1H1CP16403 213 aaKnown RBP10.44□□□□□ -0.74
VAMP1-206ENST00000538970 GGT2P36268 569 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 CD200P41217 278 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 MTNR1AP48039 350 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 PITPNBP48739 271 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 RAD23AP54725 363 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 SPIBQ01892 262 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 TRAP1Q12931 704 aaKnown RBP10.44□□□□□ -0.74
VAMP1-206ENST00000538970 ECH1Q13011 328 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 MAB21L1Q13394 359 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 SLC36A3Q495N2 470 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 NLRC3Q7RTR2 1065 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 RNF148Q8N7C7 305 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 CELF2-AS1Q8N7Q2 184 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 Q8TCH9 128 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 CMTM5Q96DZ9 223 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 PITX2Q99697 317 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 IFT27Q9BW83 186 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 MYLK2Q9H1R3 596 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 FN3KQ9H479 309 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 GORASP2Q9H8Y8 452 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 UNKLQ9H9P5 680 aaKnown RBP10.44□□□□□ -0.74
VAMP1-206ENST00000538970 RPRD1BQ9NQG5 326 aaKnown RBP10.44□□□□□ -0.74
VAMP1-206ENST00000538970 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 CYB5R1Q9UHQ9 305 aa10.44□□□□□ -0.74
VAMP1-206ENST00000538970 MDFIC2A0A1B0GVS7 189 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 F5H5K5 113 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 PHYHO14832 338 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 GADD45GO95257 159 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 SMIM11AP58511 58 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 IL13RA1P78552 427 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 MALLQ13021 153 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 CLEC12AQ5QGZ9 265 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 PRAMEF6Q5VXH4 476 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 ZNF841Q6ZN19 808 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 DCDC5Q6ZRR9 648 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 SDR9C7Q8NEX9 313 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 OR2AJ1Q8NGZ0 328 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 TAF15Q92804 592 aaKnown RBP eCLIP10.43□□□□□ -0.74
VAMP1-206ENST00000538970 ERGIC1Q969X5 290 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 SLCO4A1Q96BD0 722 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 PYURFQ96I23 114 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 NUDT16L1Q9BRJ7 211 aaKnown RBP10.43□□□□□ -0.74
VAMP1-206ENST00000538970 CDADC1Q9BWV3 514 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 MRPL22Q9NWU5 206 aaKnown RBP10.43□□□□□ -0.74
VAMP1-206ENST00000538970 ADA2Q9NZK5 511 aa10.43□□□□□ -0.74
VAMP1-206ENST00000538970 C22orf46C9J442 243 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 OR10H3O60404 316 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 FAM20BO75063 409 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 GMNNO75496 209 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 HLA-DQA2P01906 255 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 LCATP04180 440 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 IRF2P14316 349 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 NOS3P29474 1203 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 PRDX6P30041 224 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 PSMB10P40306 273 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 GSSP48637 474 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 FGF12P61328 243 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 MPPED2Q15777 294 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 MIDNQ504T8 468 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 HSP90B2PQ58FF3 399 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 WDR25Q64LD2 544 aaPredicted RBP10.42□□□□□ -0.74
VAMP1-206ENST00000538970 ZNF620Q6ZNG0 422 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 C19orf18Q8NEA5 215 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 OR10S1Q8NGN2 331 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 OR11L1Q8NGX0 322 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 MAP6Q96JE9 813 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 MAGEL2Q9UJ55 1249 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 KCNG2Q9UJ96 466 aa10.42□□□□□ -0.74
VAMP1-206ENST00000538970 POM121CA8CG34 1229 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 M0R135 149 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 HOXA3O43365 443 aaPredicted RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 IDH3BO43837 385 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 PTBP3O95758 552 aaKnown RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 FABP3P05413 133 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 CA6P23280 308 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 ANOS1P23352 680 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 RRM2P31350 389 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 IFNGR2P38484 337 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 TPTEP56180 551 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.41□□□□□ -0.74
VAMP1-206ENST00000538970 TSPAN31Q12999 210 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 DEFB112Q30KQ8 113 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 SNAI3Q3KNW1 292 aa10.41□□□□□ -0.74
VAMP1-206ENST00000538970 PGBD2Q6P3X8 592 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms