RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 DOPEY2Q9Y3R5 2298 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 A0A087WXM4 84 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 SMPD2O60906 423 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 NGFP01138 241 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 ATP6V1B1P15313 513 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 LOXP28300 417 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-202ENST00000538838 MMP16P51512 607 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 GBX2P52951 348 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-202ENST00000538838 SPHARQ15513 63 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 SNAI3Q3KNW1 292 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 ABHD4Q8TB40 342 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 BABAM2Q9NXR7 383 aa20.29■□□□□ 0.84
TMEM260-202ENST00000538838 EIF3KQ9UBQ5 218 aaKnown RBP20.29■□□□□ 0.84
TMEM260-202ENST00000538838 ICMTO60725 284 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 CD3EP07766 207 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 NANOS3P60323 173 aaKnown RBP20.28■□□□□ 0.84
TMEM260-202ENST00000538838 SLC22A25Q6T423 547 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 COLCA1Q6ZS62 124 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 EGFL6Q8IUX8 553 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 ZFP41Q8N8Y5 198 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 PPP1R14AQ96A00 147 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 PGAM5Q96HS1 289 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 G6PC2Q9NQR9 355 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF319Q9P2F9 582 aa20.28■□□□□ 0.84
TMEM260-202ENST00000538838 FASNP49327 2511 aaKnown RBP20.28■□□□□ 0.84
TMEM260-202ENST00000538838 MAGEA13PA6NCF6 341 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 TBX1O43435 398 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 RGS6P49758 472 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 NR1H2P55055 460 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 WDR38Q5JTN6 314 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 ARL9Q6T311 187 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 KCTD8Q6ZWB6 473 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 CATSPERDQ86XM0 798 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 PRSS35Q8N3Z0 413 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 KBTBD8Q8NFY9 601 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 OR8B12Q8NGG6 310 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 OR2G2Q8NGZ5 317 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 APOBEC3DQ96AK3 386 aaPredicted RBP20.27■□□□□ 0.84
TMEM260-202ENST00000538838 PBOV1Q9GZY1 135 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 SLC24A3Q9HC58 644 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 TRIM36Q9NQ86 728 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 OR52A1Q9UKL2 312 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 SLC22A13Q9Y226 551 aa20.27■□□□□ 0.84
TMEM260-202ENST00000538838 PCSK6P29122 969 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 KIR3DL2P43630 455 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 UCP2P55851 309 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 ERVS71-1P61550 626 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 SNTB2Q13425 540 aaKnown RBP20.27■□□□□ 0.83
TMEM260-202ENST00000538838 BCL2L15Q5TBC7 163 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 SP5Q6BEB4 398 aaPredicted RBP20.27■□□□□ 0.83
TMEM260-202ENST00000538838 ZNF367Q7RTV3 350 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 PSMG3-AS1Q96PY0 264 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 POFUT1Q9H488 388 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 MOB1AQ9H8S9 216 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 TBCCD1Q9NVR7 557 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 KCNN3Q9UGI6 736 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 ST6GALNAC2Q9UJ37 374 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 STARD10Q9Y365 291 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 RNF115Q9Y4L5 304 aa20.27■□□□□ 0.83
TMEM260-202ENST00000538838 SIRT4Q9Y6E7 314 aaPredicted RBP20.27■□□□□ 0.83
TMEM260-202ENST00000538838 PNMA8CA0A1B0GUJ8 204 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 SHISA9B4DS77 424 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 PLAUP00749 431 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 HSMCR30P0CW71 290 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 NR4A1P22736 598 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 MRPL28Q13084 256 aaKnown RBP20.26■□□□□ 0.83
TMEM260-202ENST00000538838 NEDD8Q15843 81 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 SPATA46Q5T0L3 261 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 FDX2Q6P4F2 183 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 FRRS1LQ9P0K9 344 aa20.26■□□□□ 0.83
TMEM260-202ENST00000538838 NUFIP1Q9UHK0 495 aaKnown RBP20.26■□□□□ 0.83
TMEM260-202ENST00000538838 TRIM64CA6NLI5 447 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 GPRIN2O60269 458 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 TTRP02766 147 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 COX6B1P14854 86 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 COL8A1P27658 744 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 TGM4P49221 684 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 NKX6-1P78426 367 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-202ENST00000538838 ALKBH1Q13686 389 aaKnown RBP20.25■□□□□ 0.83
TMEM260-202ENST00000538838 DAZAP2Q15038 168 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-202ENST00000538838 CDK5R1Q15078 307 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 ODF4Q2M2E3 257 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 GFOD2Q3B7J2 385 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 UBE2UQ5VVX9 321 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 OR1J1Q8NGS3 322 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 OR2AE1Q8NHA4 323 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 HAVCR2Q8TDQ0 301 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 PTTG3PQ9NZH4 202 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 PKDREJQ9NTG1 2253 aa20.25■□□□□ 0.83
TMEM260-202ENST00000538838 A6NNC1 897 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 PPP1CBP62140 327 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 GLYATL3Q5SZD4 288 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 RPL22L1Q6P5R6 122 aaKnown RBP20.24■□□□□ 0.83
TMEM260-202ENST00000538838 OR52H1Q8NGJ2 320 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 FCGR1BQ92637 280 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 NEUROG1Q92886 237 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 MGLLQ99685 303 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 TMEM204Q9BSN7 226 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 OR10A2Q9H208 303 aa20.24■□□□□ 0.83
TMEM260-202ENST00000538838 SP140LQ9H930 580 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms