RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SOX15O60248 233 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 OR2J2O76002 312 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SOD1P00441 154 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CD3DP04234 171 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PIPP12273 146 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DIO1P49895 249 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 VASPP50552 380 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF273Q14593 569 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 LINC00303Q3SY05 128 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 LINC00346Q8IVM7 164 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PRR22Q8IZ63 422 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MTMR14Q8NCE2 650 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 FIBINQ8TAL6 211 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PLEKHB1Q9UF11 243 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TMEM218A2RU14 115 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 RBFOX3A6NFN3 312 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 C8AP07357 584 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ADRA2CP18825 462 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 NKX2-1P43699 371 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF92Q03936 586 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SRYQ05066 204 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DMRTA1Q5VZB9 504 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MRM1Q6IN84 353 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MISPQ8IVT2 679 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF480Q8WV37 535 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 LMF2Q9BU23 707 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 NKX2-4Q9H2Z4 354 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 OR6C3Q9NZP0 311 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 C19orf25Q9UFG5 118 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SOWAHBA6NEL2 793 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CALCBP10092 127 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CD82P27701 267 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 AOAHP28039 575 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 AVPR2P30518 371 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CD200P41217 278 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ELFN2Q5R3F8 820 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 OVCH2Q7RTZ1 564 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 GOT1L1Q8NHS2 421 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CIB3Q96Q77 187 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 KCNJ15Q99712 375 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 IGHG1P01857 330 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DLX2Q07687 328 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ELAVL1Q15717 326 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 FAM78BQ5VT40 261 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 OR5B2Q96R09 309 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TNFRSF13CQ96RJ3 184 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MFSD2BA6NFX1 497 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CST7O76096 145 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF133P52736 654 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 GBX1Q14549 363 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 GDF6Q6KF10 455 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DMBX1Q8NFW5 382 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PIGCQ92535 297 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF2Q9BSG1 426 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MRIQ9BWK5 157 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DEFB126Q9BYW3 111 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 LHX3Q9UBR4 397 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 EXOGQ9Y2C4 368 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SLC22A7Q9Y694 548 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DHRS2Q13268 280 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 ANGPTL5Q86XS5 388 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PTOV1Q86YD1 416 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MKXQ8IYA7 352 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TP53RKQ96S44 253 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MARVELD1Q9BSK0 173 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TCRBV5S2A0A599 114 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SPINK4O60575 86 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 LMAN2Q12907 356 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PLXDC2Q6UX71 529 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 OLIG3Q7RTU3 272 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MUC20Q8N307 709 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 GALNT16Q8N428 558 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 RGP1Q92546 391 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 RNF150Q9ULK6 438 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 NTNG1Q9Y2I2 539 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 WSB1Q9Y6I7 421 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 M0R082 166 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 HSBP1O75506 76 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 TBPP20226 339 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 BMP5P22003 454 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PLP1P60201 277 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SPANXN5Q5MJ07 72 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 NKAIN3Q8N8D7 197 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PFN4Q8NHR9 129 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 APH1AQ96BI3 265 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CSNK1G1Q9HCP0 422 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 GSN-AS1Q9NRJ2 163 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 C2orf72A6NCS6 295 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 DDNO94850 711 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 F13BP05160 661 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CD99P14209 185 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CPMP14384 443 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SELPP16109 830 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 CXCL3P19876 107 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 PCBP3P57721 371 aaKnown RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 NSDHLQ15738 373 aa5.18□□□□□ -1.58
CSMD1-215ENST00000537824 MLF2Q15773 248 aaPredicted RBP5.18□□□□□ -1.58
CSMD1-215ENST00000537824 SLC38A9Q8NBW4 561 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms