RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ELOVL3Q9HB03 270 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 NKIRAS2Q9NYR9 191 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 PLEK2Q9NYT0 353 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 TVP23AA6NH52 213 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 SLC22A31A6NKX4 558 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 LMX1BO60663 402 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 RP2O75695 350 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 CLIC3O95833 236 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 TFP02787 698 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 SLC2A5P22732 501 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 GCH1P30793 250 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MMP15P51511 669 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 CHN2P52757 468 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 IL5RAQ01344 420 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MEP1BQ16820 701 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 CHRFAM7AQ494W8 412 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 CCDC92Q53HC0 331 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 LINC01590Q5TEZ4 76 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ZNF691Q5VV52 312 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MEDAGQ5VYS4 303 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 BCDIN3DQ7Z5W3 292 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ENTHD1Q8IYW4 607 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ZNF511Q8NB15 262 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 TFAP2CQ92754 450 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 RFKQ969G6 155 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 CDADC1Q9BWV3 514 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ZNF275Q9NSD4 429 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 KCNG2Q9UJ96 466 aa15.22■□□□□ 0.03
TNFRSF1A-209ENST00000536717 LOC100289279A0A1B0GTE1 492 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 SNTNA6NMZ2 147 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 RER1O15258 196 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ABHD16AO95870 558 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 GSTT1P30711 240 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MOGQ16653 247 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 PCGF3Q3KNV8 242 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 SLC25A30Q5SVS4 291 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 FAM166AQ6J272 317 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MEPCEQ7L2J0 689 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 ZMYND19Q96E35 227 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 Q96MT0 163 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 TEAD3Q99594 435 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 POFUT1Q9H488 388 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 TBCCD1Q9NVR7 557 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 MRPL22Q9NWU5 206 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 DNAJC27Q9NZQ0 273 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 LHFPL6Q9Y693 200 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 COMMD3-BMI1R4GMX3 469 aa15.21■□□□□ 0.03
TNFRSF1A-209ENST00000536717 FBN1P35555 2871 aaKnown RBP15.21■□□□□ 0.02
TNFRSF1A-209ENST00000536717 COL6A5A8TX70 2615 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 MXRA5Q9NR99 2828 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 H3BSA7 217 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 GPR6P46095 362 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HIST1H3AP68431 136 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 OCLNQ16625 522 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HIST2H3PS2Q5TEC6 136 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 LYPD4Q6UWN0 246 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HIST2H3AQ71DI3 136 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ERI1Q8IV48 349 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 C8orf59Q8N0T1 100 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 OR2AJ1Q8NGZ0 328 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 RHOXF1Q8NHV9 184 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HPS1Q92902 700 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ZNF582Q96NG8 517 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 INTS14Q96SY0 518 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CLN6Q9NWW5 311 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HSPE1-MOB4S4R3N1 261 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ARHGAP32A7KAX9 2087 aa15.2■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ZSCAN5BA6NJL1 495 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 WNT9BO14905 357 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CDC14BO60729 498 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 TGFAP01135 160 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 IGHV1-46P01743 117 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 MT-ND5P03915 603 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 DBHP09172 617 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 GABRB1P18505 474 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 HTR1FP30939 366 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ENTPD1P49961 510 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ZNF81P51508 661 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 TMEM33P57088 247 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 TSTQ16762 297 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ARL9Q6T311 187 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 OR1F12Q8NHA8 337 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 WDR76Q9H967 626 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 MARCH7Q9H992 704 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 WARS2Q9UGM6 360 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CDC42EP3Q9UKI2 254 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 KCNS2Q9ULS6 477 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 GRIP1Q9Y3R0 1128 aa15.19■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CCDC182A6NF36 153 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ZNF593O00488 134 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 ENTPD6O75354 484 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 GNAO1P09471 354 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 SPARCP09486 303 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CRYBB2P43320 205 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 PSG7Q13046 419 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 TMED1Q13445 227 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 FAM209AQ5JX71 171 aa15.18■□□□□ 0.02
TNFRSF1A-209ENST00000536717 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms