RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 J3QW42 95 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 PSMD9O00233 223 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 LCATP04180 440 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 OR2T7P0C7T2 308 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 SLC2A1P11166 492 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 DBTP11182 482 aaKnown RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 HSD11B1P28845 292 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 SLC6A9P48067 706 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 CX3CR1P49238 355 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 KLF3P57682 345 aaPredicted RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 CXCR4P61073 352 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 SNRPD2P62316 118 aaKnown RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 ROM1Q03395 351 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 ZNF718Q3SXZ3 478 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 MBNL2Q5VZF2 373 aaKnown RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 KCTD18Q6PI47 426 aaPredicted RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 ZNF322Q6U7Q0 402 aaPredicted RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 IZUMO2Q6UXV1 221 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 KRT77Q7Z794 578 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 C8orf59Q8N0T1 100 aaPredicted RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 ZNF283Q8N7M2 679 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 OR10H4Q8NGA5 316 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 OR5L1Q8NGL2 311 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 OR2T27Q8NH04 317 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 CNIH3Q8TBE1 160 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 ASB17Q8WXJ9 295 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 LGALS12Q96DT0 336 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 OR8B4Q96RC9 309 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 TBX5Q99593 518 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 CACNG6Q9BXT2 260 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 PTTG3PQ9NZH4 202 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 EXOGQ9Y2C4 368 aaKnown RBP10.34□□□□□ -0.75
CHD4-203ENST00000535717 LRP12Q9Y561 859 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 HSPE1-MOB4S4R3N1 261 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 A0A1W2PQL4 384 aaPredicted RBP10.33□□□□□ -0.76
CHD4-203ENST00000535717 H3BSA7 217 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 H7C417 338 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 MAGEB4O15481 346 aaPredicted RBP10.33□□□□□ -0.76
CHD4-203ENST00000535717 IGHV3-13P01766 116 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 PAX1P15863 534 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 TUBG1P23258 451 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 GCH1P30793 250 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 ALDH3B1P43353 468 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 PTH2RP49190 550 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 SELENOVP59797 346 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 PSG7Q13046 419 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 CDK5R2Q13319 367 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 HLXQ14774 488 aaPredicted RBP10.33□□□□□ -0.76
CHD4-203ENST00000535717 SNAI3Q3KNW1 292 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 DEGS2Q6QHC5 323 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 SSX6Q7RTT6 188 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 PRSS45Q7RTY3 260 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 ZNF679Q8IYX0 411 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 FBLIM1Q8WUP2 373 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 COG8Q96MW5 612 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 TUBG2Q9NRH3 451 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 TAAR3PQ9P1P4 343 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 PMF1-BGLAPU3KQ54 211 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 VPS13CQ709C8 3753 aa10.33□□□□□ -0.76
CHD4-203ENST00000535717 ITPR3Q14573 2671 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 CELSR1Q9NYQ6 3014 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 A0A1W2PPW3 197 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 PHYHO14832 338 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 NDUFS7O75251 213 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 ZNF254O75437 659 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 APOC1P02654 83 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 ANXA2P07355 339 aaKnown RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 ADRA2AP08913 450 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 BMP4P12644 408 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 PPOXP50336 477 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 ZNF121P58317 390 aaPredicted RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 ZNF85Q03923 595 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 EGR3Q06889 387 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 ALKBH6Q3KRA9 238 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 LAIR2Q6ISS4 152 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 FBXW12Q6X9E4 464 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 ZCCHC24Q8N2G6 241 aaKnown RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 HAVCR1Q96D42 359 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 CMBLQ96DG6 245 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 PERPQ96FX8 193 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 FOXC2Q99958 501 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 MROQ9BYG7 248 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 GSX2Q9BZM3 304 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 NIPAL2Q9H841 368 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 DYNLRB1Q9NP97 96 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 BRD7Q9NPI1 651 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 MRPS18AQ9NVS2 196 aaKnown RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 MRM2Q9UI43 246 aaKnown RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 ITGB1BP2Q9UKP3 347 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 IKZF2Q9UKS7 526 aa10.32□□□□□ -0.76
CHD4-203ENST00000535717 RPL36Q9Y3U8 105 aaKnown RBP10.32□□□□□ -0.76
CHD4-203ENST00000535717 M0R233 179 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 IGHV4-39P01824 125 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 NAT2P11245 290 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 RAC2P15153 192 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms