RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SERPINB7O75635 380 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 IGKV2D-40P01614 121 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 IGHV3-53P01767 116 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 KRT8P05787 483 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 HSPD1P10809 573 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ERGP11308 486 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ZNF43P17038 809 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 MUTP22033 750 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 POLR2IP36954 125 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 MAGEA12P43365 314 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 DUSP3P51452 185 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 RND2P52198 227 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 RPS23P62266 143 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 PLCXD2Q0VAA5 305 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 SELPLGQ14242 412 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 NCF4Q15080 339 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 PDK1Q15118 436 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 TMEM176BQ3YBM2 270 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 FAM133BQ5BKY9 247 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ZNF678Q5SXM1 525 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 MRPL2Q5T653 305 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 C9orf135Q5VTT2 229 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 FAM104BQ5XKR9 115 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 SPATA8Q6RVD6 105 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 TCF23Q7RTU1 214 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 SELENOHQ8IZQ5 122 aaKnown RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 RPRMLQ8N4K4 120 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 C10orf126Q8N4M7 172 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 OR10AD1Q8NGE0 317 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 OR4D6Q8NGJ1 314 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 OR10D4PQ8NGN7 298 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 RHEBL1Q8TAI7 183 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 CXorf40AQ8TE69 158 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 RAD51AP1Q96B01 352 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 CABS1Q96KC9 395 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 TMEM243Q9BU79 118 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 KRT23Q9C075 422 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 PPA2Q9H2U2 334 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 CLN8Q9UBY8 286 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ZNF443Q9Y2A4 671 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ACOT9Q9Y305 439 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 CAB39Q9Y376 341 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 NPTNQ9Y639 398 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 KCNE3Q9Y6H6 103 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 COL7A1Q02388 2944 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 DLG5Q8TDM6 1919 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 SLIT2O94813 1529 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 SMIM26A0A096LP01 95 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 IGKV2D-26A0A0A0MRZ7 120 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 IGHV1-69DA0A0B4J2H0 117 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 A0A1B0GU33 70 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 A0A1W2PQL4 384 aaPredicted RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 RGSL1A5PLK6 1076 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 KNCNA6PVL3 124 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 CHADO15335 359 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 SOX15O60248 233 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 ENTPD6O75354 484 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 FARS2O95363 451 aaKnown RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 TGFAP01135 160 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 EIF4EP06730 217 aaKnown RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 OR5AC1P0C628 307 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 CYP2F1P24903 491 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 LAP3P28838 519 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 VHLP40337 213 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 ACTG2P63267 376 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MERTKQ12866 999 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 PDZK1IP1Q13113 114 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 CASP8Q14790 479 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 KLHL40Q2TBA0 621 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 PYHIN1Q6K0P9 492 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 SLC25A25Q6KCM7 469 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 Q6ZQT7 251 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 LYPD6Q86Y78 171 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MSRB3Q8IXL7 192 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MUC15Q8N387 334 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 TCAIMQ8N3R3 496 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 NPWQ8N729 165 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 Q8NAQ8 132 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 C11orf72Q8NBR9 251 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MSANTD4Q8NCY6 345 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 SCFD1Q8WVM8 642 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 GHSRQ92847 366 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 C4orf36Q96KX1 117 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 RBM14Q96PK6 669 aaKnown RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 CNN2Q99439 309 aaKnown RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MS4A8Q9BY19 250 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 THAP9Q9H5L6 903 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 MED4Q9NPJ6 270 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 ARGLU1Q9NWB6 273 aaPredicted RBP-0.27□□□□□ -2.45
COPB1-212ENST00000534771 IL19Q9UHD0 177 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 SLC7A11Q9UPY5 501 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 CCL26Q9Y258 94 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 TRAPPC1Q9Y5R8 145 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 U3KQK5 164 aa-0.27□□□□□ -2.45
COPB1-212ENST00000534771 TENM4Q6N022 2769 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 KCPQ6ZWJ8 1503 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 SPAG9O60271 1321 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MROH5Q6ZUA9 1318 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 GOLGA8SH3BPF8 625 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PRRG1O14668 218 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms