RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TNFRSF11BO00300 401 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 DCTN3O75935 186 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 GASTP01350 101 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 CPT2P23786 658 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 PYCR1P32322 319 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 PMELP40967 661 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
COPB1-211ENST00000534234 MNAT1P51948 309 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 GNGT1P63211 74 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 TRAP1Q12931 704 aaKnown RBP7.47□□□□□ -1.21
COPB1-211ENST00000534234 ZNF181Q2M3W8 571 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 ARMCX4Q5H9R4 360 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 RPL13AP3Q6NVV1 102 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 PGAP1Q75T13 922 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 LINC00471Q8N535 108 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 CYB561A3Q8NBI2 242 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 OR52L1Q8NGH7 329 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 MAP6Q96JE9 813 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 DDOQ99489 341 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 TMEM246Q9BRR3 403 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 BTBD10Q9BSF8 475 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 MRI1Q9BV20 369 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 TRIM15Q9C019 465 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 PNRC2Q9NPJ4 139 aaKnown RBP7.47□□□□□ -1.21
COPB1-211ENST00000534234 ESM1Q9NQ30 184 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 IL20Q9NYY1 176 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 MIOXQ9UGB7 285 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 OR5V1Q9UGF6 321 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 KCNG2Q9UJ96 466 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 NUP50Q9UKX7 468 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 LYVE1Q9Y5Y7 322 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 CDH10Q9Y6N8 788 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 A0A1B0GWJ7 208 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 TVP23AA6NH52 213 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 B2RBV5 119 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 M0R135 149 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 BHLHE40O14503 412 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 FSTL3O95633 263 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 IRF2P14316 349 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 RPS2P15880 293 aaKnown RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 CD80P33681 288 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 RPS27P42677 84 aaKnown RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 PAX8Q06710 450 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 MAB21L1Q13394 359 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 KLF17Q5JT82 389 aaPredicted RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 FAM201AQ5SY85 155 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 ZNF362Q5T0B9 420 aaPredicted RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 KLBQ86Z14 1044 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 C1orf87Q8N0U7 546 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 SIGLECL1Q8N7X8 197 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 PROKR2Q8NFJ6 384 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 OR9Q2Q8NGE9 314 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 OR51L1Q8NGJ5 315 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 OR2T4Q8NH00 348 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 SPRYD4Q8WW59 207 aaPredicted RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 ZNRF4Q8WWF5 429 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 SPTSSAQ969W0 71 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 ZNF799Q96GE5 643 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 SSBP3Q9BWW4 388 aaPredicted RBP7.46□□□□□ -1.21
COPB1-211ENST00000534234 PLA2G12AQ9BZM1 189 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 ACTR3BQ9P1U1 418 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 ZNF69Q9UC07 566 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 LRCH1Q9Y2L9 728 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 PPIAL4AQ9Y536 164 aa7.46□□□□□ -1.21
COPB1-211ENST00000534234 CD300LBA8K4G0 201 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 CCNB2O95067 398 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 CA6P23280 308 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 GATA4P43694 442 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 GNB2P62879 340 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 UBA52P62987 128 aaKnown RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 PAX2Q02962 417 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 PPP1R8Q12972 351 aaKnown RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 ZNF404Q494X3 552 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 ZNF770Q6IQ21 691 aaPredicted RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 BTNL3Q6UXE8 466 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 RASSF6Q6ZTQ3 369 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 MRPL21Q7Z2W9 205 aaKnown RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 BCL6BQ8N143 479 aaPredicted RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 CELF2-AS1Q8N7Q2 184 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 SLC37A3Q8NCC5 494 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 OR8D4Q8NGM9 314 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 OR10S1Q8NGN2 331 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 RAB40AQ8WXH6 277 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 ERGIC1Q969X5 290 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 NEIL1Q96FI4 390 aaPredicted RBP7.46□□□□□ -1.22
COPB1-211ENST00000534234 PLEKHA8Q96JA3 519 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 TSSK6Q9BXA6 273 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 UFSP2Q9NUQ7 469 aa7.46□□□□□ -1.22
COPB1-211ENST00000534234 KIR2DS1A0A191URI9 304 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 ZNF593O00488 134 aaPredicted RBP7.45□□□□□ -1.22
COPB1-211ENST00000534234 ATP6V1B2P21281 511 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 PRTN3P24158 256 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 FMO3P31513 532 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 CD200P41217 278 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 MAGEA2P43356 314 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 PRKXP51817 358 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 RAD23AP54725 363 aa7.45□□□□□ -1.22
COPB1-211ENST00000534234 ZNF92Q03936 586 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms