RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 FMODQ06828 376 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 MAB21L1Q13394 359 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 CASP8Q14790 479 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 UGT3A2Q3SY77 523 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 FAM27BQ5VT28 67 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 NXNQ6DKJ4 435 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 C1orf94Q6P1W5 598 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 FBXW12Q6X9E4 464 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 RANBP3LQ86VV4 465 aaPredicted RBP5.17□□□□□ -1.58
CD44-237ENST00000534082 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 C10orf111Q8N326 155 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 CELF2-AS1Q8N7Q2 184 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 OR51D1Q8NGF3 324 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 AGR3Q8TD06 166 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 ADAMTS16Q8TE57 1224 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 AENQ8WTP8 325 aaKnown RBP5.17□□□□□ -1.58
CD44-237ENST00000534082 TMEM19Q96HH6 336 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 TMEM43Q9BTV4 400 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 MRPL13Q9BYD1 178 aaKnown RBP5.17□□□□□ -1.58
CD44-237ENST00000534082 NUF2Q9BZD4 464 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 RAB17Q9H0T7 212 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 METTL8Q9H825 291 aaKnown RBP5.17□□□□□ -1.58
CD44-237ENST00000534082 RMND5AQ9H871 391 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 SMURF2Q9HAU4 748 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 TAS2R5Q9NYW4 299 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 SELENONQ9NZV5 590 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 ADAM30Q9UKF2 790 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 TCF19Q9Y242 345 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 IFT52Q9Y366 437 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 CAPN7Q9Y6W3 813 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 A0A0B4J2E0 115 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 A0A1B0GX12 115 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 A6NDX4 124 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CCDC154A6NI56 674 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 NKX6-3A6NJ46 265 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 IQCF6A8MYZ5 107 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CENPBD1B2RD01 187 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 DOK2O60496 412 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 TRMUO75648 421 aaKnown RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 SLC22A3O75751 556 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CHRNGP07510 517 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 COX5BP10606 129 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 ACADSP16219 412 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 ECHS1P30084 290 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CDKN2CP42773 168 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 VEGFCP49767 419 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 GYS2P54840 703 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 NCALDP61601 193 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 BLCAPP62952 87 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 NPTX1Q15818 432 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 PLA1AQ53H76 456 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 SPANXN4Q5MJ08 99 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 BEND6Q5SZJ8 279 aaPredicted RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 HCP5Q6MZN7 132 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 OVCH2Q7RTZ1 564 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 HDDC2Q7Z4H3 204 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CENPVQ7Z7K6 275 aaPredicted RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 SATL1Q86VE3 508 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 TRIML2Q8N7C3 387 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 FAM216BQ8N7L0 139 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 CCDC63Q8NA47 563 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 SLC38A5Q8WUX1 472 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 ASB10Q8WXI3 467 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 ITFG2Q969R8 447 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 NMD3Q96D46 503 aaKnown RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 CPPED1Q9BRF8 314 aaPredicted RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 ZDHHC18Q9NUE0 388 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 TMEM100Q9NV29 134 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 ASIC5Q9NY37 505 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 KAAG1Q9UBP8 84 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 SF3B6Q9Y3B4 125 aaKnown RBP5.16□□□□□ -1.58
CD44-237ENST00000534082 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
CD44-237ENST00000534082 IGHV3OR15-7A0A075B7D8 119 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 A0A0G2JPF8 293 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 A0A1W2PRG6 482 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 GMNCA6NCL1 334 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 C12orf71A8MTZ7 269 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 HNRNPCL2B2RXH8 293 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 HNRNPCL3B7ZW38 293 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 M0R1W7 72 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 PLIN3O60664 434 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 HNRNPCL1O60812 293 aaKnown RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 CH25HO95992 272 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 FGF4P08620 206 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 HNRNPCL4P0DMR1 293 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 CPA3P15088 417 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 GCAP28676 217 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 DAP3P51398 398 aaKnown RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 CDH12P55289 794 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 DSTNP60981 165 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 ELF3P78545 371 aaPredicted RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 SLC7A5Q01650 507 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 CD47Q08722 323 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 ECH1Q13011 328 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 MAD2L1Q13257 205 aaPredicted RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 ENDOGQ14249 297 aaKnown RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 ZNF74Q16587 644 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 RABL3Q5HYI8 236 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 WDR38Q5JTN6 314 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms