RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
SVIP-205ENST00000533774 RNF7Q9UBF6 113 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 HUWE1Q7Z6Z7 4374 aaKnown RBP10.02□□□□□ -0.81
SVIP-205ENST00000533774 A0A1B0GVI7 797 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 GMNCA6NCL1 334 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 M0QX08 132 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 GPX2P18283 190 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 EMX1Q04741 257 aaPredicted RBP10.01□□□□□ -0.81
SVIP-205ENST00000533774 SCRN3Q0VDG4 424 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 RSPO1Q2MKA7 263 aaPredicted RBP10.01□□□□□ -0.81
SVIP-205ENST00000533774 C11orf88Q6PI97 169 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 FAM90A1Q86YD7 464 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 FUNDC1Q8IVP5 155 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 OR4C13Q8NGP0 309 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 OR1F12Q8NHA8 337 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 LRRC8CQ8TDW0 803 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 ST8SIA4Q92187 359 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 RASD2Q96D21 266 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 MAELQ96JY0 434 aaKnown RBP10.01□□□□□ -0.81
SVIP-205ENST00000533774 COG8Q96MW5 612 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 OR52B2Q96RD2 323 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 ONECUT1Q9UBC0 465 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 CAB39Q9Y376 341 aaPredicted RBP10.01□□□□□ -0.81
SVIP-205ENST00000533774 MAB21L2Q9Y586 359 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 GMEB1Q9Y692 573 aa10.01□□□□□ -0.81
SVIP-205ENST00000533774 IGHV3OR15-7A0A075B7D8 119 aa10□□□□□ -0.81
SVIP-205ENST00000533774 MEIOCA2RUB1 952 aa10□□□□□ -0.81
SVIP-205ENST00000533774 KITP10721 976 aa10□□□□□ -0.81
SVIP-205ENST00000533774 CD33P20138 364 aa10□□□□□ -0.81
SVIP-205ENST00000533774 RPL4P36578 427 aaKnown RBP10□□□□□ -0.81
SVIP-205ENST00000533774 FHL1Q13642 323 aa10□□□□□ -0.81
SVIP-205ENST00000533774 OR8B8Q15620 311 aa10□□□□□ -0.81
SVIP-205ENST00000533774 ALG10Q5BKT4 473 aa10□□□□□ -0.81
SVIP-205ENST00000533774 INTS11Q5TA45 600 aaKnown RBP10□□□□□ -0.81
SVIP-205ENST00000533774 ZNF826PQ6ZT77 177 aa10□□□□□ -0.81
SVIP-205ENST00000533774 SPERTQ8NA61 448 aa10□□□□□ -0.81
SVIP-205ENST00000533774 BEND2Q8NDZ0 799 aa10□□□□□ -0.81
SVIP-205ENST00000533774 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
SVIP-205ENST00000533774 AENQ8WTP8 325 aaKnown RBP10□□□□□ -0.81
SVIP-205ENST00000533774 ERGIC1Q969X5 290 aa10□□□□□ -0.81
SVIP-205ENST00000533774 OR4F4Q96R69 305 aa10□□□□□ -0.81
SVIP-205ENST00000533774 SSX3Q99909 188 aa10□□□□□ -0.81
SVIP-205ENST00000533774 ZNF702PQ9H963 129 aa10□□□□□ -0.81
SVIP-205ENST00000533774 HIF3AQ9Y2N7 669 aa10□□□□□ -0.81
SVIP-205ENST00000533774 OOEPA6NGQ2 149 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 RER1O15258 196 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 ECDO95905 644 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 NR2C1P13056 603 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 GUCA1AP43080 201 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 CRYBA2P53672 197 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 CTXN1P60606 82 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 BEND6Q5SZJ8 279 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 GCSAMQ8N6F7 178 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 EIF1ADQ8N9N8 165 aaKnown RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 APOBEC3DQ96AK3 386 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 TAMM41Q96BW9 452 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 CLPTM1LQ96KA5 538 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 CPPED1Q9BRF8 314 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 WACQ9BTA9 647 aa9.99□□□□□ -0.81
SVIP-205ENST00000533774 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
SVIP-205ENST00000533774 TRAV38-1A0A0B4J264 116 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 TRPC5OSA6NMA1 111 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 J3QW42 95 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 IMPA2O14732 288 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 UBDO15205 165 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 PTBP3O95758 552 aaKnown RBP9.98□□□□□ -0.81
SVIP-205ENST00000533774 PAHP00439 452 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 IGF2P01344 180 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 CTLA4P16410 223 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 TNFRSF1BP20333 461 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 ANOS1P23352 680 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 EEF1B2P24534 225 aaKnown RBP9.98□□□□□ -0.81
SVIP-205ENST00000533774 HOXD3P31249 432 aaPredicted RBP9.98□□□□□ -0.81
SVIP-205ENST00000533774 RGS6P49758 472 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 AQP6Q13520 282 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 SELPLGQ14242 412 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
SVIP-205ENST00000533774 KCNJ8Q15842 424 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 COLCA1Q6ZS62 124 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 KIRREL3Q8IZU9 778 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 PAPD5Q8NDF8 572 aaKnown RBP9.98□□□□□ -0.81
SVIP-205ENST00000533774 OR5L1Q8NGL2 311 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 PIFOQ8TCI5 191 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 KAAG1Q9UBP8 84 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 HYDINQ4G0P3 5121 aa9.98□□□□□ -0.81
SVIP-205ENST00000533774 A0A1W2PRX2 142 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 NDUFA2O43678 99 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 SNNO75324 88 aaPredicted RBP9.97□□□□□ -0.81
SVIP-205ENST00000533774 LHBP01229 141 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 SELLP14151 372 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 ZNF26P17031 533 aaPredicted RBP9.97□□□□□ -0.81
SVIP-205ENST00000533774 AMY2BP19961 511 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 CA6P23280 308 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 PPIBP23284 216 aaKnown RBP9.97□□□□□ -0.81
SVIP-205ENST00000533774 RBM34P42696 430 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms