RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 OR5L1Q8NGL2 311 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 HAVCR1Q96D42 359 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 HRASLS5Q96KN8 279 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 TTTY10Q9BZA0 68 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 TUBG2Q9NRH3 451 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 GPR160Q9UJ42 338 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
VPS28-210ENST00000529182 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 TLN2Q9Y4G6 2542 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 PSMD9O00233 223 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 LILRA1O75019 489 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 H2BFMP0C1H6 154 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 RAC2P15153 192 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 ALOX5APP20292 161 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 KITLGP21583 273 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 COL8A2P25067 703 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 PEX2P28328 305 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 HSD11B1P28845 292 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 SLC15A1P46059 708 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
VPS28-210ENST00000529182 HNRNPA0Q13151 305 aaKnown RBP11.38□□□□□ -0.59
VPS28-210ENST00000529182 GGTLC2Q14390 218 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 GK2Q14410 553 aaPredicted RBP11.38□□□□□ -0.59
VPS28-210ENST00000529182 SPRNQ5BIV9 151 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 Q6ZR03 302 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 USP51Q70EK9 711 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 GALNT4Q8N4A0 578 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 OR51G2Q8NGK0 314 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 OR8J1Q8NGP2 316 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 OR2AE1Q8NHA4 323 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 UBASH3BQ8TF42 649 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 ZNF582Q96NG8 517 aaPredicted RBP11.38□□□□□ -0.59
VPS28-210ENST00000529182 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
VPS28-210ENST00000529182 YIPF3Q9GZM5 350 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 ADGRL4Q9HBW9 690 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 IMPAD1Q9NX62 359 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 LAMP5Q9UJQ1 280 aa11.38□□□□□ -0.59
VPS28-210ENST00000529182 A0A096LNT2 108 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 DLGAP1O14490 977 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 TPD52L2O43399 206 aaKnown RBP11.37□□□□□ -0.59
VPS28-210ENST00000529182 TBX1O43435 398 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 CDC14BO60729 498 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 APOL3O95236 402 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 MT-ND5P03915 603 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
VPS28-210ENST00000529182 CSF3P09919 207 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 FOSL1P15407 271 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 RBMXP38159 391 aaKnown RBP11.37□□□□□ -0.59
VPS28-210ENST00000529182 ELF3P78545 371 aaPredicted RBP11.37□□□□□ -0.59
VPS28-210ENST00000529182 ZNF92Q03936 586 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 MALLQ13021 153 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 GID4Q8IVV7 300 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 BHLHE23Q8NDY6 225 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 BPESC1Q9GZL8 116 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 MYOZ1Q9NP98 299 aaPredicted RBP11.37□□□□□ -0.59
VPS28-210ENST00000529182 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 DECR2Q9NUI1 292 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
VPS28-210ENST00000529182 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 VWC2LB2RUY7 222 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 ENTPD6O75354 484 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 SBK2P0C263 348 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 SLC25A16P16260 332 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 HTR1FP30939 366 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 PGAP1Q75T13 922 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 MRPL21Q7Z2W9 205 aaKnown RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 SLC35F2Q8IXU6 374 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 OR2Z1Q8NG97 314 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 RDH5Q92781 318 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 TBX5Q99593 518 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 SAP30LQ9HAJ7 183 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 CYSLTR2Q9NS75 346 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 FAM118AQ9NWS6 357 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 ZNF319Q9P2F9 582 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 CGGBP1Q9UFW8 167 aaPredicted RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 WARS2Q9UGM6 360 aaKnown RBP11.36□□□□□ -0.59
VPS28-210ENST00000529182 LRP12Q9Y561 859 aa11.36□□□□□ -0.59
VPS28-210ENST00000529182 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms