RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 CXXC5Q7LFL8 322 aaKnown RBP8.97□□□□□ -0.97
CD44-227ENST00000528086 DCXRQ7Z4W1 244 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 PHC2Q8IXK0 858 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 OR8G5Q8NG78 346 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 OR2AE1Q8NHA4 323 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 ZNF420Q8TAQ5 688 aaPredicted RBP8.97□□□□□ -0.97
CD44-227ENST00000528086 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 LRGUKQ96M69 825 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 OR2V2Q96R30 315 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
CD44-227ENST00000528086 TMPRSS13Q9BYE2 586 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 SHARPINQ9H0F6 387 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 GCM1Q9NP62 436 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 TUBG2Q9NRH3 451 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 DECR2Q9NUI1 292 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 TMEM106BQ9NUM4 274 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 HIF1ANQ9NWT6 349 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 DNAJB9Q9UBS3 223 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 CGGBP1Q9UFW8 167 aaPredicted RBP8.97□□□□□ -0.97
CD44-227ENST00000528086 TMEFF2Q9UIK5 374 aaPredicted RBP8.97□□□□□ -0.97
CD44-227ENST00000528086 ZDHHC8Q9ULC8 765 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 BAIAP2Q9UQB8 552 aa8.97□□□□□ -0.97
CD44-227ENST00000528086 ANK2Q01484 3957 aa8.96□□□□□ -0.97
CD44-227ENST00000528086 PLSCR5A0PG75 271 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 CLDN25C9JDP6 229 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 M0R135 149 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SURF4O15260 269 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 PHF1O43189 567 aaPredicted RBP8.96□□□□□ -0.98
CD44-227ENST00000528086 MITFO75030 526 aaPredicted RBP8.96□□□□□ -0.98
CD44-227ENST00000528086 ZNF205O95201 554 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 LCATP04180 440 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SPARCP09486 303 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SLC2A1P11166 492 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 OSMP13725 252 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 ENTPD1P49961 510 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 RAD23AP54725 363 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 EFNB1P98172 346 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 ECH1Q13011 328 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 GK3PQ14409 553 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 HFEQ30201 348 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 GLYATL3Q5SZD4 288 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SHQ1Q6PI26 577 aaKnown RBP8.96□□□□□ -0.98
CD44-227ENST00000528086 ARL9Q6T311 187 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 UNQ6126/PRO20091Q6UXV3 157 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SPATC1Q76KD6 591 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 DPY19L4Q7Z388 723 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 BHLHE23Q8NDY6 225 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 TMEM186Q96B77 213 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 SLAMF6Q96DU3 332 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 ZMYND19Q96E35 227 aaPredicted RBP8.96□□□□□ -0.98
CD44-227ENST00000528086 ZNF799Q96GE5 643 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 DIRC2Q96SL1 478 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 IL19Q9UHD0 177 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 OPN4Q9UHM6 478 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 NPTNQ9Y639 398 aa8.96□□□□□ -0.98
CD44-227ENST00000528086 CCDC182A6NF36 153 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 F5H0A9 414 aaPredicted RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 TRAPPC2LH3BP13 241 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 TMEM178BH3BS89 294 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 M0R129 80 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 TPD52L2O43399 206 aaKnown RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 SELENOFO60613 162 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 FCN3O75636 299 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 MT-ND5P03915 603 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 ZNF823P16415 610 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 SRD5A1P18405 259 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 FMO3P31513 532 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 PRKXP51817 358 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 PAX2Q02962 417 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 MPPED2Q15777 294 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 TUSC1Q2TAM9 212 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 PLBD1Q6P4A8 553 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 ASRGL1Q7L266 308 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 LRRC28Q86X40 367 aaPredicted RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 CPOQ8IVL8 374 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 OR6K6Q8NGW6 343 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 TEX47Q8TBZ9 253 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 RNF133Q8WVZ7 376 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 DVL3Q92997 716 aaPredicted RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 SPSB4Q96A44 273 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 DACT3Q96B18 629 aaPredicted RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 DUS3LQ96G46 650 aaKnown RBP8.95□□□□□ -0.98
CD44-227ENST00000528086 ABHD6Q9BV23 337 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 CDADC1Q9BWV3 514 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 SLC25A19Q9HC21 320 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 MMP26Q9NRE1 261 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 LPAR3Q9UBY5 353 aa8.95□□□□□ -0.98
CD44-227ENST00000528086 TENM1Q9UKZ4 2725 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 RIIAD1A6NNX1 92 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 CD300LBA8K4G0 201 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 C3orf80F5H4A9 247 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 H3BN98 237 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 GLCEO94923 617 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 PTBP3O95758 552 aaKnown RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 CYB5R3P00387 301 aaPredicted RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 FSHBP01225 129 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 SBK2P0C263 348 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 ZNF3P17036 446 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms